Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0866 ATGGCTTCCCTTTTCATTGCTTCTTCGTACTCGTTTCCTTCTTCCTCATTTGTTCTCAGGAAGAACCCACCTATCAATTTTTCACCTCTCCCCAAACACCCATTTGGCCGAAGAACCCACCTCCCATTCTCTCTTACATCCACACCCAGGTCAATAAAACCCCTTAGATCCTCGAACAAAGATGACCCGGAAGGCCAGCCACCTTCTTCATCTTCAGTTGCTCTCGTTTCTGAGAAGCAAGACGACGGTGATGATGCCCAGAAGAGTGGTTTGGCTGCAGAAGTTGAATTGGGTGAAGAAAATGATTCTGGGGAGAGGGAGAACCAGCAGGAAATGGACTGGAAGCTTGATGAGGAGTTCAAGAAATTCATGGGTAATCCTTCAATTGAAGCTGCCATAAAGCTTGAGAAGAAGAGAGCCGACAGGAAGCTCAAGGAGCTCGATAGAGAAAGTAGTGACAACCCAGTCGTGGGGCTGTTTAATAGAGTGGTTCGTGATAGTCTGGCTAGAGAGAAAGAGAGGCTGGAGAAGGCAGAGGAGGCTTTCAAGGCTCTTGATCTTAACAAGTTAAAGAACTGTTTTGGGTTTGATACATTTTATGCAACTGATGTTCGGAGGTTTGGAGATGGGGGAATTTTTATTGGGAATTTGAGGAGACCCATTGAAGAAGTCATTCCTAAATTGGAGAAAAAACTCTCTGAAGCAGCAGGGAGGGAGGTTGTTTTATGGTTCATGGAGGAAAAGGCAAATGACATTACAAAACAGGTTTGCATGGTGCAGCCGAAGGCAGAAATGGATCTACAATTTGAGTCAACCAAGCTGAGCACTCCTTGGGGTTATATTAGTTCAATAGTCTTATGTGTTGCAACTTTTGGAACCATAGCTCTAATGAGTGGCTTCTTCCTTAAACCCAATGCAACATTTGATGACTACCTGGCCGATGTTGTGCCTCTGTTTTCTGGCTTTGTTACCATTTTGGGAGTTTCTGAGATAGCCACAAGGGTAACAGCAGCTCGTTATGGTGTTAAACTCAGCCCATCATTTCTTGTGCCATCTAACTGGACAGGGTGCCTGGGAGTTATGAACAACTATGAGTCATTGCTTCCAAACAAGAAAGCGCTTTTTGATATTCCTGTTGCTCGAACAGCTAGTGCCTACATTACGTCGCTGGTGCTAGCAGTTGCTGCTTTTATTGCTGATGGAAGCTTTAATGGGGGTGACAATGCATTGTACATAAGGCCCCAATTCTTTTATAACAACCCTTTGCTTTCTTTCATCCAGTTTGTCATTGGACCTTACACGGATGATCTTGGGAATGTACTTCCATATGCAGTAGAAGGTGTGGGAGTTCCTGTTGATCCCCTTGCTTTTGCTGGACTCTTAGGAATGGTGGTGACTTCTTTGAACTTGTTGCCGTGTGGAAGACTTGAAGGAGGCCGCATTGCGCAAGCTCTGTTTGGGAGAAACATTGCTACTTTGCTATCTTTTGGCACATCACTCTTGCTGGGAATTGGTGGCCTGAGTGGAAGCGTCCTCTGTTTAGCATGGGGGTTGTTTGCAACCTTCTTCCGGGGCGGAGAAGAAGTACCAGCAACAGATGAGATCACCCCATTGGGAGATGACAGGTATGCTTGGGGATTTGTCCTTGCCCTCATCTGTTTCCTCACTCTTTTCCCTAATGGTGGAGGGACATTCTCCAGCTCATTTTTCAGTGATCCATTCTTCAGGGGTGATCTGTAA 1740 0.4557 MASLFIASSYSFPSSSFVLRKNPPINFSPLPKHPFGRRTHLPFSLTSTPRSIKPLRSSNKDDPEGQPPSSSSVALVSEKQDDGDDAQKSGLAAEVELGEENDSGERENQQEMDWKLDEEFKKFMGNPSIEAAIKLEKKRADRKLKELDRESSDNPVVGLFNRVVRDSLAREKERLEKAEEAFKALDLNKLKNCFGFDTFYATDVRRFGDGGIFIGNLRRPIEEVIPKLEKKLSEAAGREVVLWFMEEKANDITKQVCMVQPKAEMDLQFESTKLSTPWGYISSIVLCVATFGTIALMSGFFLKPNATFDDYLADVVPLFSGFVTILGVSEIATRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYITSLVLAVAAFIADGSFNGGDNALYIRPQFFYNNPLLSFIQFVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIATLLSFGTSLLLGIGGLSGSVLCLAWGLFATFFRGGEEVPATDEITPLGDDRYAWGFVLALICFLTLFPNGGGTFSSSFFSDPFFRGDL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0866 579 Coils Coil 161 188 - -
Vvi3g0866 579 MobiDBLite consensus disorder prediction 62 77 - -
Vvi3g0866 579 Coils Coil 130 150 - -
Vvi3g0866 579 MobiDBLite consensus disorder prediction 28 87 - -
Vvi3g0866 579 PANTHER ZINC METALLOPROTEASE EGY1 50 569 IPR044838 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0866 K25380 - vvi:100241185 1096.65