Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0863 ATGTCCTCCAAGCTCACCACCCTCTTCATAATAGCCTCCCTCCTCTTCTTCACTCTATCCTGCAAGGCCGCCCGCCCAGGCCCTTCATTCTCCGATGTCACTCCAATGAAAATCCAACATGGGGATGTTGATGAAGCAAAGACGGTCGAGGTGGAGGAGAGCTGTGAAGGAGTTGGGGAAGAAGAGTGTTTGATGAGGAGAACACTTGCAGCTCATACAGATTACATCTACACCCAGAAGAAGAATCCATGA 252 0.5 MSSKLTTLFIIASLLFFTLSCKAARPGPSFSDVTPMKIQHGDVDEAKTVEVEESCEGVGEEECLMRRTLAAHTDYIYTQKKNP* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0863 83 PANTHER PHYTOSULFOKINES 3 6 83 IPR009438 GO:0005576|GO:0008083|GO:0008283
Vvi3g0863 83 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vvi3g0863 83 Pfam Phytosulfokine precursor protein (PSK) 43 82 IPR009438 GO:0005576|GO:0008083|GO:0008283
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0863 Vvi-Chr3 8315466 8315835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0863 - - vvi:100241199 159.073