Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0858 ATGGGCCAAGCTTGCCTTATATTTTTATTGGCCGAGGTGGGGGGTGGAGAGCAACAAAGAAGTAGTGGGAAAGCAATGGAGAGCGTGTTAAGTAGCATTCTCATATTTGGTGGTACAGGTTATATTGGTAGATGTATGGTTAAGGCCAGCGTTAAGATGGGTCATCCAACGTACGTTTATTCTAGGCCTACGACTCCACAAACACATTCCTCCAAGATAGAACTTCTCAAAGAGTTCCAGTCCATGGGCGTCGACATTGTCCAAGGAGAACTGGATGAGCATGAGAAGCTTGTGTTGGTGATTCAACAAGTAGATGTGGTCATCTCGGCCCTTGCATATCCCCAAGTTCTTGACCAACTCAATATTATAGATGCCATCAAAGTTGCAGGGACAACAAAGGGACATTTCCCAACGCATCCTCATATCAAGGTTCGCAATGCCAAGCATTTCAATTTTCGAGTTCATTCCAATCAGCTTGTTTAG 483 0.4451 MGQACLIFLLAEVGGGEQQRSSGKAMESVLSSILIFGGTGYIGRCMVKASVKMGHPTYVYSRPTTPQTHSSKIELLKEFQSMGVDIVQGELDEHEKLVLVIQQVDVVISALAYPQVLDQLNIIDAIKVAGTTKGHFPTHPHIKVRNAKHFNFRVHSNQLV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0858 160 Pfam NmrA-like family 33 138 IPR008030 -
Vvi3g0858 160 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 133 IPR036291 -
Vvi3g0858 160 Gene3D - 33 141 - -
Vvi3g0858 160 PANTHER PINORESINOL REDUCTASE-RELATED 31 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0858 Vvi-Chr3 8244780 8251952 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0858 K23050 - vvi:100260013 230.335