Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0854 ATGCTGAAGTCTGGCCTCAGAGCCTTTCTTTCCTTAAGGTTGCATTTAAATATATCTGACAAGGAGTTAACACACCTGCAGGTTGTACCAGGCAAGAAATTAGTAAAGCATTTACAAAAGGAGGTTGCCCGACTTGAAGCTGAGCTACGAAGTCCAGAACCTTCTTCCTTTGCATGTTTAAGAACTTTACTGATGGAGAAGGACTTGAAAATCCAGCAGGTAAACTTTAACTCCTTGGATGTAAAATATGTTCTTGTTGTCTTCGGATGTCTTGTTGGATATCCGAGTGATGACATTAATAAGTTCCTGTGGATGGTTCGCATAGGAGGGGGGGTATTCCCTCACATCAAGGAACCTGATTATCTGGTGAGTTGTTGTTTACTTTTCTTTATGAGACATGTGTTCACTACTCACCATTGGATGGTTCGGATATACAAATTAAAACCTCCGAAGAACAGGATTCGTGTAAAAATAAAGAAATCAAAATCGAAAGCAAGCTCCACAACCAGCTCAAAAAAAGAAGTGGAAAAAAAAAGAAGAATCCCTGGCAATGAAAGGCACTTTCAGAAGATGCTGTCTCCAATCAGTTACTTGTAA 597 0.397 MLKSGLRAFLSLRLHLNISDKELTHLQVVPGKKLVKHLQKEVARLEAELRSPEPSSFACLRTLLMEKDLKIQQVNFNSLDVKYVLVVFGCLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLVSCCLLFFMRHVFTTHHWMVRIYKLKPPKNRIRVKIKKSKSKASSTTSSKKEVEKKRRIPGNERHFQKMLSPISYL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0854 198 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 76 122 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vvi3g0854 198 MobiDBLite consensus disorder prediction 167 186 - -
Vvi3g0854 198 MobiDBLite consensus disorder prediction 158 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0854 Vvi-Chr3 8233232 8239298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0854 76 172 Miscellaneous Gene Families AT5G19690 54.225 4.24e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0854 K07151 - vvi:100853868 199.904