Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0848 ATGAATCTGCAATATTTTCTGCTTCCACCTCTACTGCTTTTCTCAGCAACTGTAGTAGTGTCTCAAAACATTGTCAGGACTCTGCCTGGTTTCTCCGGCGAGCTTCCCTTTAAGCTTGAAACTGGATATGTGAGCGTGGGTGATATAGAGTTCTTCTACTACTTTGTGGAGTCTCAGTGCAACCCTGGAGCTGACCCTCTTATTCTTTACATCAATGGAGGCCCTGGTTGTTCTGGCTTGAATGGCTTCGTTTATCAAGTTGGTCCAGTAGCTTTCAACACCACAGATTATACATGTGGCTTACCAACATTGCTACTTTATCCACACTCATGGACCAAGACGGCCAACATAATATTTTTAGATGCACCTGTGGGCACTGGCTTCTCCTATGCAACGACAACCCAAGCCTACACCACCTCAGACACATTGTCCGCCATTCAGACTATTGAGTTTTTGAAAAATTGGTTGAATGATCACCTGGATTTCAACTCGAATCCATTCTTTCTTGGGACGGATTCCTATTCAGGCATACTTGCTCCCATCATTGCTCAAGAAATAATAGATGGTAATGTTAATAAAAAATGTTATGTGTTAAAGAGTAATATGACATATTGTAAGATTGAAGCTAAATCTTATCAGTTTAAGCTTTTAAAAGGATTAGTTGTTTAA 669 0.4051 MNLQYFLLPPLLLFSATVVVSQNIVRTLPGFSGELPFKLETGYVSVGDIEFFYYFVESQCNPGADPLILYINGGPGCSGLNGFVYQVGPVAFNTTDYTCGLPTLLLYPHSWTKTANIIFLDAPVGTGFSYATTTQAYTTSDTLSAIQTIEFLKNWLNDHLDFNSNPFFLGTDSYSGILAPIIAQEIIDGNVNKKCYVLKSNMTYCKIEAKSYQFKLLKGLVV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0848 222 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 210 IPR001563 GO:0004185|GO:0006508
Vvi3g0848 222 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Vvi3g0848 222 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Vvi3g0848 222 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Vvi3g0848 222 Gene3D alpha/beta hydrolase 19 216 IPR029058 -
Vvi3g0848 222 FunFam Carboxypeptidase 19 216 - -
Vvi3g0848 222 Pfam Serine carboxypeptidase 29 194 IPR001563 GO:0004185|GO:0006508
Vvi3g0848 222 SUPERFAMILY alpha/beta-Hydrolases 25 207 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0848 Vvi-Chr3 8195668 8197771 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0848 K16296 - vvi:100249719 314.694