Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0846 ATGGAGAGTATGTTAAGTAGAATTCTCATATTTGGTGGTACAGGTTATATTGGTAGATATATGGTTAAGGCCAGCGTTAAGATGGGTCATCCAACGTACGTTTATTCTAGGCCTATGACTCCACAAACACATCCCTCCAAGATAGAACTTCTCAAAGAGTTCCAATCCATGGACGTCAACATTGTCCAAGGAGAACTGGATGAGCATGAGAAGCTTGTGTGGGTGATTCAACAAGTAGATGTGGTCATCTTAGCCCTTGCATATCCCCAAGTTCTTGACCAACTCAAAATTATAGATGCCATCAACGTTGCGGGCACAACAAAGAGGTTCCTTCCATCTGATTTTGGAGTTGAGGAGGATAGGGTGACTGTTCTTCCCCCATTCCAAGAAGTCCTTGATAAGAAGAGGATTATCAGAAGAGCCATTGAAGCTGCCGGGATTTCTTACACATTTGTGTCTGCTAACTGCTTTGGTGCATACTTTGTGAATTACTTGCTCCATCCACATGACCATTCAAACGATAGTATTACCGTCTATGGCAGTGGTGAAGCCAAGGCGGTGTTAAATTATGAAGAAGACATTGCTCTTTATACAATCAAGGTGGCAAATGATCCCACAGCCTGCAATCGGATAGTCATTTTTCGGCCCCCCAAAAACATTATTTCGCAGCTCGAATTGATCGCTCTTTGGGAGAAGAAGACCGGTAGAAGCTTCAAGAGAGTTCATGTCTCAGAGGAAGAGGTTGTGAAGCTATCTGAGACCCTGCCAAATCCGCAAAACATACCGGTGGCCATCCTTCATAGTATATTCGTAAAAGGCGCTCTAATGAATTTCGAAATAGGGGAAGATGATATCGAGGTTTCAAAACTATATCCTGATATTAACTATCATACCATTGATCAGCTCCTCGATATTTTTCTCACAAATCCCCCCAGCCCTCGTAATGCTGCCTTCGAATGA 960 0.4302 MESMLSRILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMDVNIVQGELDEHEKLVWVIQQVDVVILALAYPQVLDQLKIIDAINVAGTTKRFLPSDFGVEEDRVTVLPPFQEVLDKKRIIRRAIEAAGISYTFVSANCFGAYFVNYLLHPHDHSNDSITVYGSGEAKAVLNYEEDIALYTIKVANDPTACNRIVIFRPPKNIISQLELIALWEKKTGRSFKRVHVSEEEVVKLSETLPNPQNIPVAILHSIFVKGALMNFEIGEDDIEVSKLYPDINYHTIDQLLDIFLTNPPSPRNAAFE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0846 319 CDD PCBER_SDR_a 7 302 IPR045312 GO:0016491
Vvi3g0846 319 Pfam NmrA-like family 8 237 IPR008030 -
Vvi3g0846 319 Gene3D - 154 304 - -
Vvi3g0846 319 PANTHER PINORESINOL REDUCTASE-RELATED 6 306 - -
Vvi3g0846 319 Gene3D - 7 291 - -
Vvi3g0846 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 304 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0846 Vvi-Chr3 8186324 8188441 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0846 K23050 - vvi:100853950 627.861