Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0842 ATGGAGAGTGTGTTAAGTATCATTCTCATATTTGGTGGTACAGGTTATATTGGTAGATATATGGTTAAGGCCAGCGTTAAGATGGGTCATCCAACGTACGTTTATTCTAGGCCTATGACTCCACAAACACATCCCTCCAAGATAGAACTTCTCAAAGAGTTCCAGTCCATGGGCGTCAACATTGTCCAAGGAGAACTGGATGAGCATGAGAAGCTTGTGTCGGTGATTCAACAAGTAGATGTGGTCATCTCGGCCCTTGCATATCCCCAAGTTCTTGACCAACTCAAAATTATAGATGCCATCAAAGTTGCAGGCACATCAAAAAGGTTTCTTCCATCTGATTTTGGAGTTGAGGAGGATAGGGTGACTGTTCTTTCCCCATTCCAAGAATTCCTTGATAAGAAGAGGATTATCAGAAGAGCCATTGAAGCTGCTGGGATTTCTTACACATTTGTGTCTGCTAGCTGCTTTGGTGCATACTTTGTGAATTACTTGCTCCATCCACATGACTATTCAAACGATAGTATTACCGTCTATGGCAGTGGTGAAGCCCAGGCGGTGTTAAATTATGAAGAAGACATTGCTCTTTATACAATCAAGGTGGCAAATGATCCCACAGCCTGCAATCGGATAGTCATTTTTCTACCCCCCAAAAACATTATTTCGCAGCTCGAATTGATCGCTCTTTGGGAGAAGAAGACTGGTAGAAGCTTCAAGAGAGTTCATGTCTCAGAGGAAGAGCTTGTGAAGCTATCTGAGACCCTGCCAAATCCGCAAAACATACCCGTGGCCATCCTTCACAGTATATTCGTAAAAGGGGTTCTAATGAATTTCGAAATAGGGGAAGATGACATCGAGGTTTCAAAACTATATCCTGATATTAACTATCATACCATTGATCAGCTCCTCCATATTTTTCTCACAAATCCCCCCAGCCCTTGTTCTGCTGCCTTCGAATGA 960 0.4271 MESVLSIILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVNIVQGELDEHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFLPSDFGVEEDRVTVLSPFQEFLDKKRIIRRAIEAAGISYTFVSASCFGAYFVNYLLHPHDYSNDSITVYGSGEAQAVLNYEEDIALYTIKVANDPTACNRIVIFLPPKNIISQLELIALWEKKTGRSFKRVHVSEEELVKLSETLPNPQNIPVAILHSIFVKGVLMNFEIGEDDIEVSKLYPDINYHTIDQLLHIFLTNPPSPCSAAFE* 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0842 319 PANTHER PINORESINOL REDUCTASE-RELATED 6 306 - -
Vvi3g0842 319 Gene3D - 154 303 - -
Vvi3g0842 319 CDD PCBER_SDR_a 8 302 IPR045312 GO:0016491
Vvi3g0842 319 Gene3D - 8 291 - -
Vvi3g0842 319 Pfam NmrA-like family 8 237 IPR008030 -
Vvi3g0842 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 303 IPR036291 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0842 Vvi-Chr3 8069866 8072794 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0842 K23050 - vvi:100254843 615.535