Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0839 ATGGACGATGTGCTGTTATTCTACTACTTCGTTGAGTCTGAAAGAAATCCAAGAGAAGACCCTCTATTGCTTTGGCTCACTGGAGGTCCTGGTTGTTCTGCATTTTCTGGTCTTGCATGCGAAGTTGGTCCATTGTCATTCAACTACGAGAAATAG 156 0.4359 MDDVLLFYYFVESERNPREDPLLLWLTGGPGCSAFSGLACEVGPLSFNYEK* 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0839 51 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 45 IPR001563 GO:0004185|GO:0006508
Vvi3g0839 51 SUPERFAMILY alpha/beta-Hydrolases 6 48 IPR029058 -
Vvi3g0839 51 Pfam Serine carboxypeptidase 3 48 IPR001563 GO:0004185|GO:0006508
Vvi3g0839 51 Gene3D alpha/beta hydrolase 1 51 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0839 Vvi-Chr3 8005999 8006461 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0839 K16296 - vvi:100258422 97.4413