Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0817 ATGGAAAAGGATATGGGGGAGGAAGGCGGTTGCTTCCATGAAGCCACCATCATGGGCCAAGACGGAATCCCTCGGACAGTTAGGGTTCCGGTGGTGCAGGAACTTGCACGTCAAGGGCTCAAATTCTTGCCGGAGCGGTTCATCAAGGCGCGCAACCCTAGCCATGAGGCCAATATCACCCTTCCAATGTTTCCATCCATCAACATGGCTAAACTAGGACAGCAGGCTGAGCCCGGTGTCCGAGCCCAAGAACTAGCCCAACTAGCTAGTTGTGCCAAGGAATGGGGTATGTTTTTGGTCACGGACCATGGGATACACCCTAGTGTTGTGCATGGTGTGAAGGATGTTGTGCAAGGGTTTTTCCGGTTGCCGTTGGAGGAGAAGAGGGCGAGCGTTGGATCGTATGCAAGCATCGACAACATGGGCTATGGCCGGAGCTTTGTGAAGTCGGAGGATCAGGCATTGGACTGGATCGATCGTCTTGCCATGAAGGCTGCACCCAAAGGTGTGGATGAAGGACTTCTTGTATGGCCTCAGAAGCCTCCAAATTTCAGGCAAGTCATGGCAAAATACGTAGAGCAAGGAAGAAAACTCTGCGACCATCTTCTTCAAGCTCTTGCAGAAGCCTTGTCCCTCAGCCCACATGATTTCATCCAAAATTTTGATCCAGAATGGAGTGAAATCAATGTTAGAGTAAACTATTATCCACCATGTCCACAGCCGGAGCTGGGCTTGGGCATAACCCCACACTCAGATGCAAGTGGACTCAGTCTTCTAACCCAGTTCGGGTGCAGCGGAGGCCTCCAAGTGCTCAAGGGCCTGAACTGGGAGACAGTGCCATGGCCATGCGACGAGTTGCTGGTAAATGTAGGTGATCTGCTTGAGATAATGAGTGATGGGAGGTTGAAGAGCCCTTGGCATAGAGTGGTGGCCATGGAGAAGGAGCGATTTTCAGTTGCTTTGTTCTATAATCCTCCTTGTTCAACCGAGATTCAACCTGTTCAGGATGGAGATGGGGGTTATAAGAAGGTTGTTGTGGGAGATTATGTGCGGCATTTTTATGAGATTAGTCCTACTTTGGAGAAGCAGGCTATCGCCTATGCAAAAAAAGCTTGA 1116 0.5045 MEKDMGEEGGCFHEATIMGQDGIPRTVRVPVVQELARQGLKFLPERFIKARNPSHEANITLPMFPSINMAKLGQQAEPGVRAQELAQLASCAKEWGMFLVTDHGIHPSVVHGVKDVVQGFFRLPLEEKRASVGSYASIDNMGYGRSFVKSEDQALDWIDRLAMKAAPKGVDEGLLVWPQKPPNFRQVMAKYVEQGRKLCDHLLQALAEALSLSPHDFIQNFDPEWSEINVRVNYYPPCPQPELGLGITPHSDASGLSLLTQFGCSGGLQVLKGLNWETVPWPCDELLVNVGDLLEIMSDGRLKSPWHRVVAMEKERFSVALFYNPPCSTEIQPVQDGDGGYKKVVVGDYVRHFYEISPTLEKQAIAYAKKA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0817 371 FunFam Protein SRG1 27 357 - -
Vvi3g0817 371 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 179 IPR026992 -
Vvi3g0817 371 SUPERFAMILY Clavaminate synthase-like 29 354 - -
Vvi3g0817 371 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 325 IPR005123 -
Vvi3g0817 371 Pfam 2OG-Fe(II) oxygenase superfamily 230 325 IPR044861 -
Vvi3g0817 371 Gene3D - 26 357 IPR027443 -
Vvi3g0817 371 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 64 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0817 Vvi-Chr3 7693498 7695038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0817 53 324 Glycosyltransferase AT5G59530 31.655 2.75e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0817 - - vvi:100246340 748.429