Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0803 ATGACGAACCAGCTCCAAGAACACATTATTGGAATCCCAGTCAGTTGCCAATACGATAAGCCATCTCCTCCAAATGGCTCTGGGGCAATAATTCCAAAAAAAATGAATTCAATGAATTATAGGATGAACAATAACAGGAAGAAGGCAGACAATTTTGTGGATGGAGTCCGAGAGCATGTGAGATTAGGGCTTAAGTTCTCTGAAACGGTGAAGGGAAAGTTGAGCTTGGGGGCTAGGATTCTTCAAATTGGGGGAGTGAAAAGAGTTTTCAAGCAAAATTTTGGTGTTAGAGAAGGAGAAAAGCTATTGAAGGTTTCCCAATGCTATTTATCGACAACAGCAGGCCCTATAGCTGGCCTCCTCTTTATATCTACTCAAAGAGTTGCCTTTTGTAGTGAAAGATCAATCAAATTTTCTTCTCCAAATGGTGAATTAGTTAGAATCCATTACAAGGTCTCTATCCCACTAAGAAAGATAAAGAGAGCCAATCAAGGCGAGAATGTGAAAAAACCTTCTCAGAAGTACATGGAAATTGTTACTATGGATAACTTTGACTTCTGGTTTATGGGATTCTTGAATTACCAGAAAGCTTTCAGCTATCTTCGACAGGCAATCTCTCAAGTACAAAATCCAGTCCAGAAGTGA 645 0.3953 MTNQLQEHIIGIPVSCQYDKPSPPNGSGAIIPKKMNSMNYRMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGVKRVFKQNFGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQGENVKKPSQKYMEIVTMDNFDFWFMGFLNYQKAFSYLRQAISQVQNPVQK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0803 214 Gene3D - 86 207 IPR011993 -
Vvi3g0803 214 PANTHER GEM-LIKE PROTEIN 2 4 207 IPR037848 -
Vvi3g0803 214 SMART gram2001c 88 166 IPR004182 -
Vvi3g0803 214 Pfam GRAM domain 89 208 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0803 Vvi-Chr3 7417454 7418376 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0803 - - vvi:100254942 417.542