Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0802 ATGTCTGAAGCTGCTACTGAAGCTGGCAACTTGGAAGAACATGGTGTGCTTGCACTTTTCGGTATGTTCAATTCAGAAGGAAAACCAATATTGTTGTGCTCTTGCAATGACAATTCTGTTCGGCTATATGAATTACCATCATTCACCGAGAGGGCCAGGATTTTTGCAAAGGAAGAAGTCCGAGCGATTCAAATAGGTCCTGGGGGACTCTTTTTCATTGGGGATGGAACTGGACAAGTTGATGTTTGGAAATGGCAGGCGGAGCCAACTTCATTGGCATCCTGA 285 0.4491 MSEAATEAGNLEEHGVLALFGMFNSEGKPILLCSCNDNSVRLYELPSFTERARIFAKEEVRAIQIGPGGLFFIGDGTGQVDVWKWQAEPTSLAS* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0802 94 Gene3D - 10 94 IPR015943 GO:0005515
Vvi3g0802 94 SUPERFAMILY WD40 repeat-like 23 86 IPR036322 GO:0005515
Vvi3g0802 94 PANTHER - 7 93 IPR044715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0802 Vvi-Chr3 7415296 7415825 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0802 - - vvi:100248072 177.948