Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0798 ATGATCGCGGTCTTTGGCCGATCTCCGCTAGGGTTTTGGTCGCTGCGACTGGAGTCACCGCCGGTTTTGCCGAAGCTAGGGTTTTGGGATTCAGGGAGTGATAAAAGGACTGGTTTGAGCGTTGGTGTTGTAACTCCTGTGAGATCCAAGGGCTTCTGGTCTGTTGTGGCCATGGAGAGGTTGCAAATGGCGTGTGTGAATGAGAAGGTTTATAATGTTGGAGATTTAGGGAAGGATGGATCTGATTTGGTTGAGAAGTCCACCAATGGTCATGTCACAGTTTCAGGGAGGACTGTCAGCCAATTGGCTACCATTGGAAATTCAACAAACATTATGTGGCATGGATGTCCAGTAGATAAGGTTGAAAGACAGAAGTTACTTAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGTTCAGGGAAGAGCTCTGTGGCATGTGCTTTGAGTCAAAGCTTATACAGCAGAGGAAAGTTGTCTTACATTCTTGATGGGGACAATGTCAGGCATGGCCTAAACCGTGACCTTAGTTTTAAAGCAGAGGATCGTGCTGAAAATATACGAAGGGTTGGAGAGGTAGCCAAGCTGTTTGCAGATGCTGGACTTATTTGCATTGCCAGCCTGATTTCTCCCTACAGAAGGGATAGGGATGCCTGTCGTGCACTTGTACCGGAAGGAAGTTTTATCGAGGTGTTCATGGATGTGCCACTCCAAGTCTGTGAAGCGAGGGACCCAAAGGGTCTGTATAAGCTTGCACGTGCAGGGAAAATTCAAGGTTTTACAGGGATTCATGATCCATATGAGCCACCATTAAATTGTGAGATAGTACTAAAACATAGTGAAGAGGTCTGTACCTCCCCTAGAGACATGGCTGAGAAAGTGATACATTACTTGGAGGAGAATGGGTACCTTCAGGCATAG 927 0.4649 MIAVFGRSPLGFWSLRLESPPVLPKLGFWDSGSDKRTGLSVGVVTPVRSKGFWSVVAMERLQMACVNEKVYNVGDLGKDGSDLVEKSTNGHVTVSGRTVSQLATIGNSTNIMWHGCPVDKVERQKLLKQKGCVIWITGLSGSGKSSVACALSQSLYSRGKLSYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEVAKLFADAGLICIASLISPYRRDRDACRALVPEGSFIEVFMDVPLQVCEARDPKGLYKLARAGKIQGFTGIHDPYEPPLNCEIVLKHSEEVCTSPRDMAEKVIHYLEENGYLQA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0798 308 Hamap Adenylyl-sulfate kinase [cysC]. 129 304 IPR002891 GO:0000103|GO:0004020|GO:0005524
Vvi3g0798 308 NCBIfam adenylyl-sulfate kinase 113 286 IPR002891 GO:0000103|GO:0004020|GO:0005524
Vvi3g0798 308 FunFam Adenylyl-sulfate kinase 102 308 - -
Vvi3g0798 308 Pfam Adenylylsulphate kinase 130 283 - -
Vvi3g0798 308 CDD APSK 133 280 IPR002891 GO:0000103|GO:0004020|GO:0005524
Vvi3g0798 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 302 IPR027417 -
Vvi3g0798 308 Gene3D - 102 308 IPR027417 -
Vvi3g0798 308 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 108 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0798 Vvi-Chr3 7342268 7356731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0798 K00860 - vvi:100249733 625.935