Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0786 ATGGTGGTCTGCAAATGCCGAAAGGCAACCAAGTTGTACTGTTTCGTGCACAAGGTCCCGGTTTGTGGAGAATGCATCTGTTTTCCTGAGCACCAAATATGCGTGGTCCGTACGTACTCAGAATGGGTGATAGATGGAGAGTATGATTGGCCTCCAACATGTTGTCTTTGTCAAGCGGCACTCCAAGAGGGGACGGATTCTCAAACGACTCGATTAGGCTGCTTGCATATCATACACACAAATTGTTTGGTTTCACATATTAAAAGTTTTCCTCCGCACACTGCACCAGCTGGATATGCATGTCCTGCATGTTCCACTTCGATATGGCCCCCTAAAAGCGTTAGAGATTCAGGGTCACGTCTTCATTCAAAATTGAAGGAAGCTATCATGCAGACTGGCATGGAAAAGAACTTATTTGGAAATCATCCAGTTTCATTACCAGCAGTGGAATCTCGTAGTCCTCCTCCTGCTTTTGCCTCAGATCCTCTGATGCATGTCTCTGCTACAAGCTCATCACCCTCAATAGCAAAGGATGAAACAAACTTTACTGATGGTTACTCATCTGCCAATGGAACTGGCCCTTCTAAACTTTCCGTATCAGATATTGTGGAAATAGATGGTCCTAGCTCAGCAGGGAATGCGCAGATCTCTAATCATGAGACAAATTTTATGAAAAGCACAAGTCCCTCTGGTCCTGGTGCTACAACGCGAAAGAGTGGATTATATGTTGAAAGGCAAAACTCCGAAATCTCTTATTATGCTGATGATGATGAAGATGGGACGCATAAGAAGTACACTCGAAGGGGTCCTTTCCACCACAAGTTTCTTAGAGCATTGCTGCCTTTCTGGTCTTCTGCACTGCCAACTTTACCAGTGACTGCACCTTCACGGAAAGATGCATCAAATGCAGATGATGTCCTGGAATCTCGTCCACGGCATCAGAGATCTTCTCGGATGGATCCAAGAAAAGTCCTTCTTATCATAGCAATAATGGCATGCATGGCAACTATGGGTATTCTGTACTACAGACTTGCACAACGTGGTTTGGGAAAAGAGATGCCTGATGATGAGCAGCAGTGA 1080 0.45 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPTCCLCQAALQEGTDSQTTRLGCLHIIHTNCLVSHIKSFPPHTAPAGYACPACSTSIWPPKSVRDSGSRLHSKLKEAIMQTGMEKNLFGNHPVSLPAVESRSPPPAFASDPLMHVSATSSSPSIAKDETNFTDGYSSANGTGPSKLSVSDIVEIDGPSSAGNAQISNHETNFMKSTSPSGPGATTRKSGLYVERQNSEISYYADDDEDGTHKKYTRRGPFHHKFLRALLPFWSSALPTLPVTAPSRKDASNADDVLESRPRHQRSSRMDPRKVLLIIAIMACMATMGILYYRLAQRGLGKEMPDDEQQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0786 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 142 IPR013083 -
Vvi3g0786 359 MobiDBLite consensus disorder prediction 301 318 - -
Vvi3g0786 359 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Vvi3g0786 359 MobiDBLite consensus disorder prediction 293 318 - -
Vvi3g0786 359 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 355 IPR039043 -
Vvi3g0786 359 SUPERFAMILY RING/U-box 37 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0786 - - vvi:100242874 749.584