Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0782 ATGAAGTTTATGAAGCTTGGATCAAAGCCAGATTCCTTTCAGACTGATGGAAACAGTGTTAGGTATGTGGCATCAGAGTTGGCAACTGACATTGTGGTTAATGTAGGGGAGGTGAAGTTTTATCTGCATAAGTTTCCATTACTGTCCAAGAGTGAGTGCTTGCAAAAATTGGTTGCAGCCACAAATGACGGAAACAGTGATGAAGTCCACATTCCTGATATTCCTGGCGGGCCCTCTGCCTTTGAGATATGTGCCAAGTTCTGTTATGGTATGACTGTCACCCTCAATGCTTATAATGTTGTTGCAGCTCGTTGTGCGGCTGAGTATCTAGGGATGCATGAGACTATTGAGAAAGGGAACCTCATCTACAAAATTGATGTTTTCCTTAACTCTAGCATTTTTCGTAGCTGGAAGGATTCTATCATTGTTCTTCAAACCACAAAGTCTCTTTTACCATTGTCTGAGGACCTCAAGGTGATCAGCCACTGCATTGACTCTATAGCTTCCAAAGCTTCCATTGATGTTTCCAGGGTGGATTGGTCCTATACCTATAATCGGAAGAAGCTCCCAGAGGAAAATGGTACTGATCCAAAATGGAATGGTGTTGGAAACCGTCCAGTGGTTCCAAAGGACTGGTGGGTTGAGGACCTTTGTGAGCTTGAAATTGATTTGTACAAGCGTGTTATAATGAGTATCAAAACACAAGCAGTGATTTCTCATGAAGTGATTGGAGAAGCATTGAAAGCTTTTGCTCTCAAAAGGCTGCCAGGTTTCTCCAAGGGCATGATCCCAAATGGAGATACAGCCAAGTTTAGATCAACAGTAGATACAATTGTGTGGCTTTTACCTGCAGATAAATGCAGTGTCTCCTGTAGTTTCTTGCTCAAGTTGTTAAAAGCTGCCATTTTTATGGATTCAGGAGAGAGAGCAAAGAGAGAGCTGGTGAGGAGAATAGGGCAGCAACTGGAGGAAGCCTCTGTGAATGATCTCCTGATAAGAGCACCAGAAGGGGAAACTGCAAGGTATGATGTTGATACAGTACAGCAAATAGTAGAGGAGTTTCTGATGCAAGAGCAGAATGCTGAGATTGAATCAACAGCTGCCCATGAGCTTCAGGAAGTAAGAAGGCCAGGGATTTTATCGGATGCTTCCAAACTGATGGTGGCAAAGCTGGTGGATGGGTACCTTGCTGAAATTGCCAAGGACCCAAATCTACCTCTGTCAAAGTTTGTTGATCTAGCAGAGCTGGTCTCTGGTTTCTCTCGACCAGCTCATGACGGTCTATACCGAGCCATTGACATGTATCTCAAGGAGCACCCTGGGATCAGCAAGAGTGAAAGGAAGAGAATTTGCAGGCTGATGGACTGCAAGAAGCTATCAGTTGATGCATGCATGCATGCAGTGCAGAATGAGAGACTCCCCTTGCGGGTAGTTGTGCAGGTACTCTTTTTTGAGCAGGTCCGGGCCACCGCTACATCAGGCAGCAGCACCCCTGACCTACCTAAAGGCATCAAGGATCTAAACAGTGCATCCCACGGCAGCTCAAGGTCAGTAACAACCAACACAGAAGAAGACTGGGATGCTGTGGCCACTCTGGAGGAGCTCAAGGCCCTCAAGGGGGAGCTAGCTTCCTTAAGGTTGGGCAATGGAGTGGGAGCAAGTGAGCGTAATGGTGGAGACAGTAAAGGCAGCATCGACAAGGCTGCCATTAACAAAATGAAAGGATTGCTCATGTCAAAGAAGATCTTCACCAAACTCTGGTCAAGCAAATCAGGACAAGGTGAGAATAGCGGATCAGATTCATCAGGGAGCTCTGGTTCTGCCAACCCAGAAGAAGCCAAATCCACACCCTCCAGAAACAGGAGGCATTCAGTCTCCTGA 1881 0.4604 MKFMKLGSKPDSFQTDGNSVRYVASELATDIVVNVGEVKFYLHKFPLLSKSECLQKLVAATNDGNSDEVHIPDIPGGPSAFEICAKFCYGMTVTLNAYNVVAARCAAEYLGMHETIEKGNLIYKIDVFLNSSIFRSWKDSIIVLQTTKSLLPLSEDLKVISHCIDSIASKASIDVSRVDWSYTYNRKKLPEENGTDPKWNGVGNRPVVPKDWWVEDLCELEIDLYKRVIMSIKTQAVISHEVIGEALKAFALKRLPGFSKGMIPNGDTAKFRSTVDTIVWLLPADKCSVSCSFLLKLLKAAIFMDSGERAKRELVRRIGQQLEEASVNDLLIRAPEGETARYDVDTVQQIVEEFLMQEQNAEIESTAAHELQEVRRPGILSDASKLMVAKLVDGYLAEIAKDPNLPLSKFVDLAELVSGFSRPAHDGLYRAIDMYLKEHPGISKSERKRICRLMDCKKLSVDACMHAVQNERLPLRVVVQVLFFEQVRATATSGSSTPDLPKGIKDLNSASHGSSRSVTTNTEEDWDAVATLEELKALKGELASLRLGNGVGASERNGGDSKGSIDKAAINKMKGLLMSKKIFTKLWSSKSGQGENSGSDSSGSSGSANPEEAKSTPSRNRRHSVS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0782 626 MobiDBLite consensus disorder prediction 588 614 - -
Vvi3g0782 626 SUPERFAMILY POZ domain 21 117 IPR011333 -
Vvi3g0782 626 MobiDBLite consensus disorder prediction 492 523 - -
Vvi3g0782 626 PANTHER OS12G0117600 PROTEIN 24 603 IPR043454 -
Vvi3g0782 626 MobiDBLite consensus disorder prediction 508 523 - -
Vvi3g0782 626 Gene3D Potassium Channel Kv1.1; Chain A 6 121 IPR011333 -
Vvi3g0782 626 Pfam BTB/POZ domain 26 118 IPR000210 GO:0005515
Vvi3g0782 626 Pfam NPH3 family 211 464 IPR027356 -
Vvi3g0782 626 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Vvi3g0782 626 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Vvi3g0782 626 MobiDBLite consensus disorder prediction 588 626 - -
Vvi3g0782 626 CDD BTB_POZ_NPY3-like 20 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0782 Vvi-Chr3 7103653 7113572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0782 8 494 EF-hand Containing Proteins AT3G44820 35.192 7.88e-96 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0782 - - vvi:100263403 1204.5