Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0780 ATGATGGTGGCTGCCATTTCTGAAGCAGCTTCGACCAACCGACCAAACCCCAAGGCCTCCTCTCACACCCACGATACCCATCTTCGGAATCCAGCTAGACCTCCACTTTTGCCTTCTGAGAAGGACAATGGCCTCGTTCCTAAACGACCCAAATCGAGACAGGTCTCTTCCAGATACATGTCCCCATCACCTTCCACCTCCGCTTCTGTGCCCAGGCGCTGCTCTTCGCCGCTTATCAGCCGCTCCACGAATTCCACCGCCTCATCAACGCCATTGCCGGTGGCTGCGTCGTCGACGTCTTCTTCTTTTCCGCGGTCGCACTCCGTGGACCGGAGGCGGCCGGCCACGGCGGCGCCGGGTAGTGCCGGAGAAGTATCGGCGGCGTCGAGGCTGTTGTTCACTTCGACGCGGAGTTTGTCGGTCTCATTTCAAGGGGAGGCGTTTTCGCTTCCGATTAGCAAGGCTAAGGCGGCGCCGAATTTGGGTAACGTGAGGAAGGGAACGCCGGAGAGGCGAAAGCCGACGCCGGTGAGGGGTTCTGGAGCTGTGGATCAGGTTGAGAATTCGCGGCCATGGCCAGGGAGGTCCCGGTCGGTGAATGTACTAGCGAGAAGTTTCGATTGTAGTGTTGATAGGAAGAAAAGCATTGGATCTGGGATAGTGGTTGGGTCGTTTCAGCAATCAATGATTGATGAGAGTAGAAGGGCTTCATTTGATGGAAGATTGAGTTTGGATTTGGGCAATGCTGAGTTGTTGAAGGTAACTAAGCAAGACCCAGATGGCAATTCAGCTAATGACTCATCTGTGCCAACTGATCTCACTGCATCTGATACAGATAGTGTTTCCTCCGGTAGCACTTCAGGATTGCAAGAATGTGCTGGTGTTAGTGGTAGGCGAAGTGGGCCTCGAGGTATTGTCGTCTCGGCGAGGTTTTGGCAGGAGACTAATAGCCGGCTGAGGCGGTTGCAGGATCCAGGATCACCTTTGTCAACAAGCCCTGGTTCCAGAATGGCAGTGGCTGCCAAATTCATACAATCAAAAAAATTCCCAAGTGATAACCCATTGGCCTCCCCTCGGACAATGATGTCCCCTATAAGGGGAGCTACTAGGCCTGCATCTCCGAGTAAACTTATGGCATCATCCATGCCTGTGTCGTCTCCAATAAGGGCATCATCTCCAGCCAGGTTGAGAAATGCAGTTGCTAGTCCTTTAAGTAGTAGTTCAAGCATTGCTCCTTCAATTCTTAGTTTCTCTGTTGATGTTCGGAGAGGGAAGATGGGGGAAAATCGGATTGTTGATGCACACTTGTTGAGACTTTTGTATAATCGGCACTTGCAATGGCGGTTTGTAAATGCAAGGGCAGATGCTGCCTTGTTGGTGCAAAGGATGCGGGCAGAGAGAAACCTATGGAATGCATGGATAACGATCTCAAAGCTACGCGACTCTGTCACCAGTAAGAGAATGAAATTACAGTGGTTGAGGCGAAAGCTGAAGCTAACTTCCATCCTCAAGGGGCAAATGGCTTATTTGGAGGAATGGGCTCTTCTAGAAAGAGATCATTCTAGTTCTTTGCATGGAGCAATAGAAGCTTTGAAGGCCAGCACTCTCCGTCTTCCAGTTGTTGGAGCAATAGCAGATATCCAAAGCTTGAAGGATGCTGTTGGTTCAGCAGTTGATGTAATGCAGGCTATGGCATCCTCAATTTGCTCTCTTTTGTCAAAGGTGGAGGAAATGAACTCCTTGGTGGTCGAAATCGCTGATGTCACTGCAAAGGAGCGAGCTTTGCTGGAACAATGCCGAGACTTCTTGTCCACATTGGCAGCCATGCAGGTTAAATACAGTAGCTTGAGAACGCATATATTACAACTAAATCGCCTCCCGGCCACCAGCAGCCTGACAACAACCCTGACAACACGCATCTAA 1923 0.5075 MMVAAISEAASTNRPNPKASSHTHDTHLRNPARPPLLPSEKDNGLVPKRPKSRQVSSRYMSPSPSTSASVPRRCSSPLISRSTNSTASSTPLPVAASSTSSSFPRSHSVDRRRPATAAPGSAGEVSAASRLLFTSTRSLSVSFQGEAFSLPISKAKAAPNLGNVRKGTPERRKPTPVRGSGAVDQVENSRPWPGRSRSVNVLARSFDCSVDRKKSIGSGIVVGSFQQSMIDESRRASFDGRLSLDLGNAELLKVTKQDPDGNSANDSSVPTDLTASDTDSVSSGSTSGLQECAGVSGRRSGPRGIVVSARFWQETNSRLRRLQDPGSPLSTSPGSRMAVAAKFIQSKKFPSDNPLASPRTMMSPIRGATRPASPSKLMASSMPVSSPIRASSPARLRNAVASPLSSSSSIAPSILSFSVDVRRGKMGENRIVDAHLLRLLYNRHLQWRFVNARADAALLVQRMRAERNLWNAWITISKLRDSVTSKRMKLQWLRRKLKLTSILKGQMAYLEEWALLERDHSSSLHGAIEALKASTLRLPVVGAIADIQSLKDAVGSAVDVMQAMASSICSLLSKVEEMNSLVVEIADVTAKERALLEQCRDFLSTLAAMQVKYSSLRTHILQLNRLPATSSLTTTLTTRI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0780 640 MobiDBLite consensus disorder prediction 255 300 - -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 258 293 - -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 350 389 - -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 159 195 - -
Vvi3g0780 640 Pfam QWRF family 280 597 IPR007573 -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 54 105 - -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 1 126 - -
Vvi3g0780 640 PANTHER AUGMIN FAMILY MEMBER 38 625 - -
Vvi3g0780 640 MobiDBLite consensus disorder prediction 374 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0780 Vvi-Chr3 7082071 7097828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0780 - - vvi:100242868 1137.09