Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0777 ATGGCTTCCCAAAGCCTCCGTCTCCGCCTCCCAACCACAAACCCCACCTCCTCCTCACCACCAATCCCATCATTCCACGTGTCCCTCCCCACCCTCCCACCACCTCCCAGGCCTCGCCGCCGCCTGTCGCTCTCTCCCTCCACCTCCAGCGCTGTTGTCGAAATCTCTAGACTCTTCCTCACTAAACTCCAACAAAATTTTCTCCCCAATGCCGAAGAGGTCGCCGCAATCAAGAGCCTCCGGGACACAGCGGTATGCGCGGCGGCGCCACTGTTCTTTGCTGCGATGCGGGACCGGCCGAGAGGGTACTTGAACACGCCGCTGACGGTGGTGGCGGCGGGAATGGCGAAATGGCTGGATATATACAGCGGAGTGTTGATGGTGAGGGTGATGCTGAGTTGGTTTCCAAATATTCCGTGGGAGCGGCAGCCATTGTCGGCGATCAGAGATCTGTGCGACCCGTATTTGAATCTGTTCAGAAATATTATTCCCCCGGTGTTTGATGCTTTGGATTTAAGCCCGCTGTTGGCATTCTCGGTGTTGGGTGTGCTGGGTTCCATTCTGAATAACAGCATGGGAATGTACTGA 588 0.5646 MASQSLRLRLPTTNPTSSSPPIPSFHVSLPTLPPPPRPRRRLSLSPSTSSAVVEISRLFLTKLQQNFLPNAEEVAAIKSLRDTAVCAAAPLFFAAMRDRPRGYLNTPLTVVAAGMAKWLDIYSGVLMVRVMLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDALDLSPLLAFSVLGVLGSILNNSMGMY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0777 195 MobiDBLite consensus disorder prediction 1 45 - -
Vvi3g0777 195 MobiDBLite consensus disorder prediction 26 41 - -
Vvi3g0777 195 Pfam YGGT family 119 187 IPR003425 GO:0016020
Vvi3g0777 195 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 38 188 IPR003425 GO:0016020
Vvi3g0777 195 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0777 Vvi-Chr3 7065044 7065631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0777 - - vvi:100253131 323.168