Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0773 ATGGTGCCAAATCAAAATTTTACTCGAATTGACACATTAGAGCTAAAAGCTCTTATTGTTCGAAGGATTGGCCGCCAGAAAGCAGAAAAGTACTTTGATCAGCTGAAAAGATTATTTAGTTTGAAGCTTAGTAAGCGTGAGTTTGATAAGTTTTGCCTCTGGACGATTGGAAGAGAGAATATCCCTCTTCACAATCGACTAATTGGTTCCATTCTTAAGAATGCTTGCCTCTCCAAAGTTCCTCCATTGAAAGGTAGAAATGTGGGTGTGCCCAAAGATGTTAAAGTTGCTAATGGGTATCAGAGAAACTGTCTGCAGTCACTCTATGGAGACGCATTTCCTCCATCCCCTCGCAAGGGCAGGTCTCAAGTCAATCGGGATCGCAGGTTTCGGGACCGCCTGAGTCCTCTTGGGCCATTAGGAAAGCCCCAAAGTGTTGCATGTGAGGAATTGGCTTCCAAGGCACAAGAGCAGCAAAGTGCTACTGAATTGCTTTCTCTTGGTAGCAGACCTCCAGGTGAGGTGGTTTCCGTGGAAGATGGGGAAGAAGTTGAACAATTGGCCGGGAGCCCAAGCGTCCAAAGTAGAAGCCCAGTTAGAGCTCCTTTTGGAATTTCTATGAACATGGGTGGTCGTAAGTCTCTGTGTAATGGATCTATCTGCAATTATCATCCCGAAACCTGTCATAACAGCGGTGAGCTACCTGATACTGGATCTCTCAGGAGTCATTTGGAGCGGAAGTTGGAGATGGAGGGCTTTGGTGTCTCGATGGACTGTGTTAACCTGTTGAATAATTCATTGGATGTGTTTCTGAAGAGATTAATTGAGCCTTGTCTGCAATTAGTGGGATCCAGATGTGGCAATGAGCACTTGAGACAACTAAATGCCCAAACCTTGCCTGGTATGAATAGGATTTTACCTGGAAGATATATTCAGAAGTCGAGAAAACCCAAATATGCATCCGTGTTGGATTTTCGTGTTGCAATGGAGTTGAATCCCCAGATTCTTGGAGAAGATTGGCCTATACAACTTGAGAAGATTTGCTTGCATGCTTCTGAAGAATGA 1065 0.4441 MVPNQNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDKFCLWTIGRENIPLHNRLIGSILKNACLSKVPPLKGRNVGVPKDVKVANGYQRNCLQSLYGDAFPPSPRKGRSQVNRDRRFRDRLSPLGPLGKPQSVACEELASKAQEQQSATELLSLGSRPPGEVVSVEDGEEVEQLAGSPSVQSRSPVRAPFGISMNMGGRKSLCNGSICNYHPETCHNSGELPDTGSLRSHLERKLEMEGFGVSMDCVNLLNNSLDVFLKRLIEPCLQLVGSRCGNEHLRQLNAQTLPGMNRILPGRYIQKSRKPKYASVLDFRVAMELNPQILGEDWPIQLEKICLHASEE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0773 354 MobiDBLite consensus disorder prediction 159 200 - -
Vvi3g0773 354 MobiDBLite consensus disorder prediction 121 135 - -
Vvi3g0773 354 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 282 IPR024738 GO:0070461
Vvi3g0773 354 PANTHER TRANSCRIPTIONAL ADAPTER 1 3 353 IPR024738 GO:0070461
Vvi3g0773 354 MobiDBLite consensus disorder prediction 110 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0773 Vvi-Chr3 7040975 7042039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0773 - - vvi:100256708 696.812