Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0772 ATGAGAGGCGTTTTTCTCAAGAACGGTCTTGTTCATCGTTTTTCTCAGATTTGCAAGTCAGCTGATGCGAAGAACCCATTTCTGATCCCCAGAGATCGTGATGCTAAGGGCAGTCACCATTATCACAATTTCTTGAACAAGAGCAGAGAATCGGCTTCGGGGGCCTTTTCTATTCCCTTTTCTTCTTCATCATCTCCTTCTCGATCAAGAGTTGGATTTGTTGCGTGGTATTTGGGGCTGGTCCAGTCACGACCCCTTCTCACCAAAAGTGTCACTTCCTCGCTTATTTACGCTGCTGCGGATTGCACATCCCAGACAATTTCTCGTCAATCTACAGAACCATATGATTTTATGAGGACTCTGCGCATGGCTGGATATGGTATGCTAATTTTAGGACCATCACTGCATTTTTGGTTCAATTTCATGTCAAAAGTCCTTCCACAGCGGGATCTAATCACTACATTGAAGAAAATATGCCTGGGGCAGACAACCTTTGGACCTTTTATGACTGCTATTTTCTTCTCCGCAAATGCAGCTGTACAAGGTGAAAATGGTTCAGATATCATTGCCCGATTGAACCGAGACTTGATTCCTACACTGATAAATGGTGTTATGTACTGGCCCCTATGCGATTTTGTTACATTCAAATTCATCCCTGTCCATTTACAGCCATTAGTAAGCAATTCATTTTCATACCTATGGACGATCTACATGACATACATGGCAAGCCTTGAGAGAGCAGACACCCAGTGA 753 0.4343 MRGVFLKNGLVHRFSQICKSADAKNPFLIPRDRDAKGSHHYHNFLNKSRESASGAFSIPFSSSSSPSRSRVGFVAWYLGLVQSRPLLTKSVTSSLIYAAADCTSQTISRQSTEPYDFMRTLRMAGYGMLILGPSLHFWFNFMSKVLPQRDLITTLKKICLGQTTFGPFMTAIFFSANAAVQGENGSDIIARLNRDLIPTLINGVMYWPLCDFVTFKFIPVHLQPLVSNSFSYLWTIYMTYMASLERADTQ* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0772 250 Pfam Mpv17 / PMP22 family 180 238 IPR007248 GO:0016020
Vvi3g0772 250 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 73 241 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0772 Vvi-Chr3 7035492 7038641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0772 70 246 Miscellaneous Gene Families AT2G14860 69.492 3.75e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0772 K13348 - vvi:100241306 482.256