Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0770 ATGGATTCTTCAACCTCCGTTCTCTGCTTTCTTCTCCCTATCCTCCTCTCTCTCACGTCCACCCTCTCTACGAATTCTGAAGGAAATGCGCTACATGCATTGAGAAGCAGGCTGTCGGACCCCACAAACGTGTTGCAGAGCTGGGACCCGACCCTGGTCAATCCCTGCACCTGGTTTCATGTCACCTGCGACTCCAACAATCGTGTCATTCGTCTGGACTTGGGTAATTCCAATATTTCTGGGTCTTTGGGGCCTGAGCTCGGCCAGCTTCAGCATCTGCAGTACCTGGAGCTTTATAGGAACAACTTTGAAGGGAAAATACCAAAGGAGTTGGGTAATTTGAAAAACCTTATTAGCATGGATTTGTATGACAACAAATTTGAAGGGAAAATCCCCAAATCTATTGCCAAATTGAAGTCACTCCGATTTCTGCGTCTCAACAATAACAAGCTGACAGGATCCATCCCCAGGGAGCTAGCCACCCTCTCTAACCTCAAAGTTTTTGATGTTTCAAATAATAACCTGTGCGGAACAATTCCAGTTGATGGCCCCTTTGCTAATTTCCCCATGGAGAGTTTCCAAAACAACAGATTCAGTGGGCCAGAGCTACAAGGACTGGTGCCCTACGACTTTGGATGCTGA 642 0.4704 MDSSTSVLCFLLPILLSLTSTLSTNSEGNALHALRSRLSDPTNVLQSWDPTLVNPCTWFHVTCDSNNRVIRLDLGNSNISGSLGPELGQLQHLQYLELYRNNFEGKIPKELGNLKNLISMDLYDNKFEGKIPKSIAKLKSLRFLRLNNNKLTGSIPRELATLSNLKVFDVSNNNLCGTIPVDGPFANFPMESFQNNRFSGPELQGLVPYDFGC* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0770 213 SUPERFAMILY L domain-like 25 201 - -
Vvi3g0770 213 FunFam Somatic embryogenesis receptor kinase 1 23 208 - -
Vvi3g0770 213 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Vvi3g0770 213 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Vvi3g0770 213 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Vvi3g0770 213 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0770 Vvi-Chr3 6995198 6998300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0770 1 196 Receptor kinase-like Gene Family AT1G71830 60.606 1.34e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0770 - - vvi:100261805 409.838