Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0768 ATGAAAGGCAAAGGTGGTTGGAGCCCCAAGTTAGAATTGCCGCTTCTCTTCCTCTCATGGTCCCTTTTCTTCCTCGCTGGCCTCTTTGGGTCCATGCTGTTCTCTCAGGATGTAAATGGAGTTCGATCACCGCCGAGATTGCTTGAATCGGTGGAGGAGGAGTACAGTTCGATGCCGCATGGAGAGACTGGAGAGAGTTCTGTTGATTTGATCCCATTTCAGGTCTTGAGTTGGAAACCACGAGCTCGCTATTTTCCTCACTTTGCAACTGCAGAACAATGCCAAAGCATAATTGAAATGGCAAAGTCAGGCCTTAGTCCATCAACCCTGGTTTTGCGAAAGGGAGAAACTGAAGAGAGCACTAAGGGAATTAGAACTAGTTCAGGTACATTTATTAGTGCATCAGAAGACAAAACTGGAATTCTGGACTTCATTGAGCGAAAAATTGCTAAGGCTACAATGATTCCAAGAAACCATGGAGAGGTATTCAATATTCTGAGGTATGAGATTGGGCAGAGGTATAATTCACATTATGATGCAATCAGCCCTGCTGAATATGGACTACAAACAAGCCAAAGGATTGCTTCCTTCTTGTTGTATCTATCTGATGTAGAAGAAGGTGGAGAAACTATGTTTCCTTTTGAGCATGACTTGAATATCAATACGTTCAATTCCAGAAAATGCATTGGCTTGAAAGTGAAGCCACGAAGAGGGGATGGACTTTTATTTTATTCAGTGTTTCCAAATGGCACAATTGATTGGACATCTATGCATGGAAGCTGTCCAGTGATTGAAGGGGAGAAGTGGGTGGCTACAAAGTGGATCAGAGATGAACAACAAGAAGACTAA 849 0.4311 MKGKGGWSPKLELPLLFLSWSLFFLAGLFGSMLFSQDVNGVRSPPRLLESVEEEYSSMPHGETGESSVDLIPFQVLSWKPRARYFPHFATAEQCQSIIEMAKSGLSPSTLVLRKGETEESTKGIRTSSGTFISASEDKTGILDFIERKIAKATMIPRNHGEVFNILRYEIGQRYNSHYDAISPAEYGLQTSQRIASFLLYLSDVEEGGETMFPFEHDLNINTFNSRKCIGLKVKPRRGDGLLFYSVFPNGTIDWTSMHGSCPVIEGEKWVATKWIRDEQQED* 283
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0768 282 FunFam Prolyl 4-hydroxylase 4 72 277 - -
Vvi3g0768 282 Pfam 2OG-Fe(II) oxygenase superfamily 164 276 IPR044862 -
Vvi3g0768 282 Gene3D q2cbj1_9rhob like domain 73 276 - -
Vvi3g0768 282 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 158 277 IPR005123 -
Vvi3g0768 282 SMART p4hc 80 276 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi3g0768 282 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 59 276 IPR045054 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0768 Vvi-Chr3 6976055 6984113 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0768 K00472 - vvi:100266991 530.406