Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0766 ATGAAAGGCAAGGGCAAAGGTGTTTGGAGGCCCAAGTTAGGGTTGCTGCTTCTCTTCATCTCATGGTCCTTTTTCTTTCTCGCTGGGCTCTTCGGATCCATGCTTTTCTCTCAGGATGTAAATGGAGTTCGATCACAGCCGAGATTGCTTGAATCGGTGGAGGAGTACAGTCCGATGCCGCATGGAGAGACTGGGGAGAGTTCTGTTGATATGATCCCATTTCAGGTCTTGAGTTGGAAACCACGAGCTCTCTATTTTCCTCGCTTTGCAACCGCAGAACAATGCCAAAGCATAATTGAAATGGCAAAGTCACACCTTAGACCGTCAACCTTGGCTTTGCGGCAGGGAGAAACTGATGAGAGCACGAAGGGAACAAGAACTAGTTCAGGTACATTTATTAGTGCATCAGAAGACAAAACTGGGATTCTGGACTTTGTTGAGCGAAAAATTGCAAAGGCTACAATGATTCCAAGAAGCCATGGAGAGGCATTCAATATTCTGCGGTATGAGATTGGGCAGAGGTATAATTCACATTATGATGCATTCAACCCAGCTGAATATGGACCACAAACAAGCCAAAGGGTTGCTTCCTTCTTGTTGTATCTATCTGATGTAGAAGAAGGTGGAGAAACTATGTTTCCTTTTGAGCATGACTTGAATATCGGTACGGGCTATGATTACAAAAAATGCATTGGTTTGAAAGTGAAGCCACAAAGAGGGGATGGGCTTCTATTTTATTCAGTGTTTCCAAATGGCACTATTGATCGGGCAATGCATCAATGA 783 0.4419 MKGKGKGVWRPKLGLLLLFISWSFFFLAGLFGSMLFSQDVNGVRSQPRLLESVEEYSPMPHGETGESSVDMIPFQVLSWKPRALYFPRFATAEQCQSIIEMAKSHLRPSTLALRQGETDESTKGTRTSSGTFISASEDKTGILDFVERKIAKATMIPRSHGEAFNILRYEIGQRYNSHYDAFNPAEYGPQTSQRVASFLLYLSDVEEGGETMFPFEHDLNIGTGYDYKKCIGLKVKPQRGDGLLFYSVFPNGTIDRAMHQ* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0766 260 Pfam 2OG-Fe(II) oxygenase superfamily 165 247 IPR044862 -
Vvi3g0766 260 SMART p4hc 81 260 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi3g0766 260 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 65 257 IPR045054 -
Vvi3g0766 260 Gene3D q2cbj1_9rhob like domain 74 260 - -
Vvi3g0766 260 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 260 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0766 Vvi-Chr3 6905947 6914289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0766 K00472 - vvi:100244673 511.531