Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0755 ATGGATCGGAAGCAAGGGTTCTTCGCGGCGTTGAAGGAGGAGGTGGTGAGGGGGCTTTCTCCGGCGAGGTCGCGGGCGAAGAGTCCGGGGAGGGCGGGGTCGCCGATGTCGGGGCTGTTACGGAGGAGGAAGCAGAGCCACAACCAGTACGTGGCAAATCCGGAGCCGCTGATTTCGAGATCGGGGAGTTTGAGGCCGGTGGTGGGGGAGACTTTGACGCCATTGATGGAGGGTCCGGATCCAGACGGCAGCGAAATCGGTGAGTCGAAGCGGAGTGGCTTAGGCTTAGGGCATTGGATGAAGGGACAGCTGTCCAGGACTCCGTCTGTGACTTCTGCGGCGTACAGGAGGTCTGATCTCAGGCTGTTGCTTGGGGTGATGGGCGCTCCTCTCGCCCCGGTGCACGTTAGCACCACTGACCCTTTGCCTCACCTGAGCATCAAGGACACTCCCATTGAAACTTCTTCTGCCCAGTACATATTGCAGCAATACACAGCTGCCTCTGGAGGGCAAAAACTGCAGAACTCAATTCGAAATGCTTATGCCATGGGAAAGGTGAAGATGATAGCTTCTGAGTTTGAGACTGCAACTAGGGTTTTGAAGAACCGGAATGCCTCAAAAGATGCAGATTCAGGTGGGTTTGTGCTCTGGCAGATGAATCCAGACATGTGGTATGTTGAACTTGCAGTTGGGGGTAGCAAGGTTCATGCTGGCTGCAATGGCAAGCTTGTCTGGAGGCACACACCCTGGCTGGGAGCGCATTCTGCAAAGGGCCCTGTTAGGCCGTTGCGTCGAGCTCTTCAGGGCCTTGATCCAAGAACCACCGCTAGTATGTTTGCTGATGCAAGATGCATTGGAGAAAAGAAGATCAATGGTGAGGATTGCTTTATCCTCAAGCTATGTGCTGACCCTCAGACATTGAAGGCCAGGAGTGAAGGCCCAGCAGAGATCATAAGACATGTTTTGTTTGGCTACTTCAGCCAGAAAACGGGTCTTCTTGTTCACATGGAGGATTCCCATCTTACCCGCATCCAATCCAATGGTGGAGATGCTGTTTACTGGGAAACCACAATCAATTCATTCCTGGAAGATTATAGGCCAGTTGAAGGGATCATGATAGCTCACTCTGGGCGGTCAATAGTGACCCTTTTCAGGTTTGGAGAGATGGCAATGAGCCATACCAAGACCAGGATGGAAGAAACTTGGACAATTGAAGAGGTGGCATTCAATGTTCCTGGCCTTTCAGTGGACTGTTTCATCCCTCCAGCTGACTTAAGATCAGGGTCCATTAGTGAAGCCTGTGAACTCCCTCATGAAGAAAGAGGAAAGAGCTCAGTCTCCCTAGCAGCACACCGTGCCAAAGTTGCTGCGCTGGAGAAAACGCATGATGGTGGCATTGATAATGTGATTTGGAGGATGGAAGTCTAA 1428 0.5231 MDRKQGFFAALKEEVVRGLSPARSRAKSPGRAGSPMSGLLRRRKQSHNQYVANPEPLISRSGSLRPVVGETLTPLMEGPDPDGSEIGESKRSGLGLGHWMKGQLSRTPSVTSAAYRRSDLRLLLGVMGAPLAPVHVSTTDPLPHLSIKDTPIETSSAQYILQQYTAASGGQKLQNSIRNAYAMGKVKMIASEFETATRVLKNRNASKDADSGGFVLWQMNPDMWYVELAVGGSKVHAGCNGKLVWRHTPWLGAHSAKGPVRPLRRALQGLDPRTTASMFADARCIGEKKINGEDCFILKLCADPQTLKARSEGPAEIIRHVLFGYFSQKTGLLVHMEDSHLTRIQSNGGDAVYWETTINSFLEDYRPVEGIMIAHSGRSIVTLFRFGEMAMSHTKTRMEETWTIEEVAFNVPGLSVDCFIPPADLRSGSISEACELPHEERGKSSVSLAAHRAKVAALEKTHDGGIDNVIWRMEV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0755 475 MobiDBLite consensus disorder prediction 41 56 - -
Vvi3g0755 475 MobiDBLite consensus disorder prediction 18 62 - -
Vvi3g0755 475 Pfam Protein of unknown function (DUF620) 181 422 IPR006873 -
Vvi3g0755 475 PANTHER LIPASE 70 426 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0755 Vvi-Chr3 6773340 6775606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0755 - - vvi:100257657 958.362