Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0740 ATGGAAGATGGGGAGTGGGTTCTGGTGAGGCCACCCACAGAAATCGAATGCTGGAGCCCCGGATGGGGCGGGGGCGAGGATGAGGGCGGCTCCTCTGACCCGCTCAAGGTTAGATTTTTTGGACCGGCCAAGCACTGGACCGACGCTCTTCCCATCGGTAATGGCCGCCTCGGGGCTATGGTCTGGGGCGGCGTCGCATCGGAGACGCTTCAGCTTAATGAGGGCACCCTTTGGACTGGGACTCCTGGAAACTACACAAACCCAGATGCTCCAAAAGCGCTATCAGAAGTCAGAAAACTTGTTGATAATGGTGACTATGTTGCAGCTACTGAAGCAGCAGTCAAGTTGTCAGGGAATCCTTCCGATGTTTATCAGCTTCTAGGTGATATTAATCTAGAATTTGAGGATTCTCATCTTGCATATGCTGAAGAAACATACAGTAGAGAGCTAGACTTGGATACTGCAACAGTAACGATAAAATATTCTGTGGGTGATGTAGAGTACACTAGAGAGCATTTTGCCTCTTATCCAGATCAGGTGATTGTGACGAAGATCTCTGGAAGCAAACCAGGGTCAGTTTCTTTTACAGTATCACTAGACAGCAAGTCACATCATCATTCAAACTCAAGTGGCAAAAGTCAGATTATTATGGAAGGAAGTTGTCCTGGTAAAAGAATTCCACCAAAAGTGTATGAAAATGATAACCCACAGGGAATTCTGTTTTCTGCTGTCCTTGATTTACAAATTAGTGATGGCAGGGGAGTGATAAATGTTTTGGATGATAAGAAACTGAAGGTTGAAGGTTCAGATTGGGCTGTTTTGTATCTGGTGGCATCGTCTTCATTTGACGGTCCATTCACTAAGCCTATAGACTCTAAAATAAATCCTACTTCAGAGGCTCTCAGTACATTGAAGTCAATAGGAAACTTTTCATATTCTGATCTTTATGCACGCCATTTGAATGACTATCAAAACCTTTTTCATCGAGTTTCACTACAGCTTTCAAAAAGTTCCAAAAGTGTTATGAGTGATGGGTCTCTGGAAATGAAGAAACCTATGTCCTCCAGGACTGGTTTGTATTTGAAAGGAAGTGAAGACAGAGTTTCAACTGCAGCCAGGGTGAAATCTTTTGGAACTGATGAAGATCCTTCATTAGTGGAGCTTCTGTTCCAGTATGGTCGATATTTGCTCATCTCTTGTTCTCGACCTGGAAGTCAGCCGGCAAACCTACAGGGAATTTGGAACAAGGATATTGAGCCAGCATGGGATGGGGCTCCTCACTTGAACATAAATCTTCAAATGAATTACTGGCCTTCCCTTCCATGCAACCTTAGCGAGTGCCAAGAACCTTTATTTGATTACATGTCCTCTCTTTCAATCAATGGGAGTAAAACTGCAAAAGTGAACTACGAAGCTAGTGGTTGGGTTACACATCAAGTGTCTGATATATGGGCAAAAACATCACCAGATCGAGGCCAGGCTGTGTGGGCATTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATCTATGGGAACATTATACTTTCACAATGGACAAGGATTTTCTGAAAAATAAGGCATATCCCTTACTAGAAGGATGTGCAAGATTTCTCTTGGACTGGTTGATTGAAGGACGTGGAGGATATCTGGAAACCAATCCATCAACTTCTCCAGAACATATGTTTATTGCTCCAGATGGTAAGCCTGCTAGTGTGAGCTACTCAACAACCATGGACATTGCAATCATAAGAGAAGTTTTCTCCGCAGTAGTTTCTGCTGCTGAGGTGCTGGGAAAAAATGAGGATGAGCTCGTTCAGAAAGTCCGTCAAGCTCAACCAAAACTTCCTCCAACAAAAATTGCTAGAGATGGTTCCATTATGGAATGGGCACAAGATTTTGAGGACCCAGAGGTGCATCATCGACATGTATCCCATCTATTTGGCCTATATCCAGGGCACACAATAACAGTAGAGAAAACCCCGGACCTTTGTAAAGCTGTGGACTATACCCTCTATAAAAGAGGGGAGGACGGTCCAGGATGGTCAACTACATGGAAAACAGCTCTGTGGGCACGTCTCCACAACAGTGAGCATGCATATAGGATGGTCAAGCATTTATTTGACCTGGTGGATCCTGCTCGTGAAGCTGATTTTGAAGGTGGACTATACAGTAACTTGTTTACTGCACATCCTCCTTTCCAGATTGATGCCAACTTCGGTTTCTGTGCAGCAGTTGCAGAAATGATTGTTCAGAGCACCTCAAAAGACCTCTATTTGCTCCCTGCTCTTCCCCGGGACAAATGGGCGAATGGTTGTGTCAAAGGATTGAAGGCACGTGGTGGTGTTACAGTCAATGTATGCTGGAAAGAAGGAGAACTTCACCAGATTGGGGTGTGGTCAAAAGACCAGAATTCTACTAGAAGATTACATTATAGAGGAAGTATAGTAACAGCGAAAATGTTGGCTGGCAGAGTCTACACATTCGATAGGCAGTTAAAATGTGTGAAAACATACACACTCTGA 2523 0.4427 MEDGEWVLVRPPTEIECWSPGWGGGEDEGGSSDPLKVRFFGPAKHWTDALPIGNGRLGAMVWGGVASETLQLNEGTLWTGTPGNYTNPDAPKALSEVRKLVDNGDYVAATEAAVKLSGNPSDVYQLLGDINLEFEDSHLAYAEETYSRELDLDTATVTIKYSVGDVEYTREHFASYPDQVIVTKISGSKPGSVSFTVSLDSKSHHHSNSSGKSQIIMEGSCPGKRIPPKVYENDNPQGILFSAVLDLQISDGRGVINVLDDKKLKVEGSDWAVLYLVASSSFDGPFTKPIDSKINPTSEALSTLKSIGNFSYSDLYARHLNDYQNLFHRVSLQLSKSSKSVMSDGSLEMKKPMSSRTGLYLKGSEDRVSTAARVKSFGTDEDPSLVELLFQYGRYLLISCSRPGSQPANLQGIWNKDIEPAWDGAPHLNINLQMNYWPSLPCNLSECQEPLFDYMSSLSINGSKTAKVNYEASGWVTHQVSDIWAKTSPDRGQAVWALWPMGGAWLCTHLWEHYTFTMDKDFLKNKAYPLLEGCARFLLDWLIEGRGGYLETNPSTSPEHMFIAPDGKPASVSYSTTMDIAIIREVFSAVVSAAEVLGKNEDELVQKVRQAQPKLPPTKIARDGSIMEWAQDFEDPEVHHRHVSHLFGLYPGHTITVEKTPDLCKAVDYTLYKRGEDGPGWSTTWKTALWARLHNSEHAYRMVKHLFDLVDPAREADFEGGLYSNLFTAHPPFQIDANFGFCAAVAEMIVQSTSKDLYLLPALPRDKWANGCVKGLKARGGVTVNVCWKEGELHQIGVWSKDQNSTRRLHYRGSIVTAKMLAGRVYTFDRQLKCVKTYTL* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0740 840 PIRSF UCP007663 22 837 IPR016518 GO:0004560
Vvi3g0740 840 Pfam Glycosyl hydrolase family 65, N-terminal domain 41 284 IPR027414 -
Vvi3g0740 840 PANTHER ALPHA-L-FUCOSIDASE 2 29 838 - -
Vvi3g0740 840 FunFam Alpha-L-fucosidase 2 269 749 - -
Vvi3g0740 840 Gene3D - 277 749 IPR012341 GO:0005975
Vvi3g0740 840 SUPERFAMILY Six-hairpin glycosidases 296 796 IPR008928 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0740 K15923 - vvi:100266190 1697.56