Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0739 ATGGATATTTGGTCTTGGATATGCGAGCTGCCTAACTCGGACCAGTGGGTCGAGTCGGAGTCACCTCCCACCTTCCAACTCGTCAGCTCCAAACCAACTAAAGCCGACACAACCCAGTCGATTCAACTCAGAGCTGAACGAACATCCGGGTCTAACTCGGAAGCCTTGGTTACTTTCTCCGTCTACGTGCATGGCTTCCACCCTTCTAATGCAGAGAAGACCCTCTGGGTTTCTGACGCGTGTCCTCTCGCATCTGACAAGCCATTCCTCCCACTGCTTCTTCAATTGGTCCAAGAGATCGTGTCCCGTTCACCCACCGCGCATGATAGCACCTGCCCCCGCTCCCAGCTCCAGAAACTCAGACCCGAACCTGTTGCGTGGGTCCTTGACTCGCACTCGCCCGAGTCGCTCTCCAGTTTCTTCAACCTCGTCTTCCTCACGCGCCTCTTCTGGCTCTGTGTGTGCGATGCGCCCAGTGAAGTCGGCTCTCTCTACTTCGACTCGCTCCTGACTCCCCATATCGAACTGTTCTCCTGCAACCACGCGCATGTGCTGCGAACGTTCTTGGTTTCCATCGGAGTGGACGCTGAGCTGTGTTTTATGCGCTCCGTTGGGTACATGTTAGCAAAATGGTTGATTTTAAGGGAGGTGGGCGTAGGATTGCAAATGTTAACCCCAGTGCCGAAGCTAGGATTTTCATACGCAATGGAAGCTCATGGGTTGTGGACTCTGAAGGCCTACGCTCCGGTGATGGCGATGACTCGCACGCGCTTCAAGGGTCAAGAAAAACAGTACTCCGCAATCGAGGCTAAGGAGTCCGTTCTGAGATATGCCCTAGCCCACCAACAGCTCGAGGTCGTGATTCAGTTGGAATATTCCGTTGCCTTCCATGACGGCTATATTCAAGTTAATACACGTGTCAATAATCTGCGGTTCCACATCGTAAAACTAGGATTTTCTAAAAATGATGACATGGATTACATCGACGAGAGGCATTTCCCGTCGAGGATTAGGGTTTGGATTGGGCCAGAGATTGGGTCGACTTACGTAGCAAGTTTGAGCTTGGGCCGGTCTACAGAAAACATAGAGAAAGAAGTGAAAACGCAGAGAACAGTAAAGGGTAATTTTGGAAAAATGAAAATATCAAGGGTAAAAGCAACAGCGAGGTTGTCGACGAGGACAAGGACGAAGAATTGGAGGTGGGATCAGGACGCGGAAGGGAACGCTGCCATTTTTGAAGCAGTTCTATGCGAAAACAATAGCGGTATGGAAGTAGCGACGAACAAGCCACCTAACACTATTAGTGAGGGTGACAAATGGGAGAATGGGTTGGGAAAGAGGTACTCTGGAGCGAATAGAATGTTTTCAAAGAGTGGGGGGTTAGTTTTTGCAGGGGATGAGTATGGAGAAGGGGTAGAGTGGAGACTGAGCAAAGAAATGGAAGGGAGTGTGTTGAAATGGAGAATAGGAGGTCAAATTTGGTTAAGTTATTGGCCTAATGAAATCAAGACTTCATACTTTGAAACAAGATGTGTGGAATGGTGCGACGAGGTGGATTTGCCTTTAATTCCTTGTAAATAG 1581 0.4946 MDIWSWICELPNSDQWVESESPPTFQLVSSKPTKADTTQSIQLRAERTSGSNSEALVTFSVYVHGFHPSNAEKTLWVSDACPLASDKPFLPLLLQLVQEIVSRSPTAHDSTCPRSQLQKLRPEPVAWVLDSHSPESLSSFFNLVFLTRLFWLCVCDAPSEVGSLYFDSLLTPHIELFSCNHAHVLRTFLVSIGVDAELCFMRSVGYMLAKWLILREVGVGLQMLTPVPKLGFSYAMEAHGLWTLKAYAPVMAMTRTRFKGQEKQYSAIEAKESVLRYALAHQQLEVVIQLEYSVAFHDGYIQVNTRVNNLRFHIVKLGFSKNDDMDYIDERHFPSRIRVWIGPEIGSTYVASLSLGRSTENIEKEVKTQRTVKGNFGKMKISRVKATARLSTRTRTKNWRWDQDAEGNAAIFEAVLCENNSGMEVATNKPPNTISEGDKWENGLGKRYSGANRMFSKSGGLVFAGDEYGEGVEWRLSKEMEGSVLKWRIGGQIWLSYWPNEIKTSYFETRCVEWCDEVDLPLIPCK* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0739 526 PANTHER EXPRESSED PROTEIN 1 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0739 Vvi-Chr3 6512843 6514423 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0739 - - vvi:100243866 1079.7