Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0734 ATGTTGACGCTAAGCGACTCCACCTATTTCGTATGGGATCTCTTCCAGCAGAACACCGAACAAGACAGAAAGGACGTGCAGAAAGTGACGTTGATAATTGATAATATGGACGGAGTTGCCTATGCTACCAACGACGAGATTCACTTTAATGCCAACTATATCGGAAACTACTCCGGCGACCTGAGGATGGAATTCACTGGGATCATTTTCCATGAGATGACACACATTTGGCAGTGGAATGGTGATGGACAGGCGCCAAGAGGACTAACAGAGGGAATTGCAGATTTTGTAAGGTTGTCGGCTGATTTTTCCCCCAGCCACTGGGTGCAACCCGGCGAGGGTGAGAGATGGGACCAGGGTTACGACGTGACTGCTCGGTTTTTGGACTACTGA 393 0.4885 MLTLSDSTYFVWDLFQQNTEQDRKDVQKVTLIIDNMDGVAYATNDEIHFNANYIGNYSGDLRMEFTGIIFHEMTHIWQWNGDGQAPRGLTEGIADFVRLSADFSPSHWVQPGEGERWDQGYDVTARFLDY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0734 130 Pfam Peptidase of plants and bacteria 3 130 IPR007541 -
Vvi3g0734 130 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 49 112 - -
Vvi3g0734 130 PANTHER - 3 130 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0734 Vvi-Chr3 6419942 6420334 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0734 - - twl:120002427 219.935