Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0727 ATGACGTCATCTGGATTCCGGCCCCTTGACGACAAGTCTCTCGTAGAGTACATAAAGGCCACGCCTGCTCTCTTCTCCAAGCTTGCAAACCAGCTCCATGGATTGCAGATCAAAGAAGTGGGCGACGGCAATCTCAACTTCGTCTACGTCGTCATCTCTTCCGCCGGCTCCTTCGTCATCAAACAGGCGTTGCCGTACATACGTAGTATAGGGGAATCGTGGCCGATGACGAAGGACCGGGCGTATTTTGAAGCGACGGCTTTGAGAGAGCAGCGTCGCTGGTGCTCCAATCATGTGCCGGAGGTTTATCATTTTGATAGGGAAATGGCTGTAATCGGTATGAGGTACTTGGAGCCTCCGCATATAATTCTTAGAAAGGGCCTGATTGCTGGAATTGAGTACCCGTTGCTTGCAGAACACATGTCGGAGTTCATGGCGAGGACTCTTTTCTTCACATCTCTTCTATACCATGACACAACAGAGCACAAACGTGCAGTTGCTGAATTTTGTGGAAATGTGGAGTTATGTCGGCACACTGGGCAAGTTGTTTTCTCTGATCCATACAAAGTATCTCAGTATAATTGGTGGACTTCCCCTTATCTTGACCGTGATGCCGAGGCAGTTCGAGAGGATAACATTTTGAAGCTTGAAGTTGCTGAGTTGAAATCTATGTTCTGTGAGAGATCGCAAGCCCTAGTACATGGAGATCTTCATACTGGTTCAGTTATGGTTACCCCTGATTCGACTCAAGTTATAGATCCAGAATTTGGCTTTTATGGACCAATGGGGTTTGATATAGGCGCTTTTTTAGGAAACTTGATTTTGGCATACTTTGCACAAGATGGGCATGATGATCAAGTGAATGATAGAAAAACATATAAAAAATGGATTTTGAAGACAATAGAACAGACTTGGAATTTTTTCCACAAAAAATTTACTGCATTATGGAATGAACACAGGAATGGCTCTGGTGAGGCGTATCTTCCAGAAATTTATAATAACCCTGAACTTCAGCTTCTTACACAAAAGAAATACATGCAAGATTTGTTGCATGACACCCTCGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTAGCACATGTTGAGGATTTTGAATCAATTGTTGATGCTAGCAAGCGAGCTAACTGTGAGAGACAGGCACTTGTATTTGCAAAGATGCTTTTGAAGGAAAGGAGAAAATTTCAGGCTATCACTGAAGTTGTTTCAGCCATTCAGCAAGAACAATCATGA 1260 0.4357 MTSSGFRPLDDKSLVEYIKATPALFSKLANQLHGLQIKEVGDGNLNFVYVVISSAGSFVIKQALPYIRSIGESWPMTKDRAYFEATALREQRRWCSNHVPEVYHFDREMAVIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSEFMARTLFFTSLLYHDTTEHKRAVAEFCGNVELCRHTGQVVFSDPYKVSQYNWWTSPYLDRDAEAVREDNILKLEVAELKSMFCERSQALVHGDLHTGSVMVTPDSTQVIDPEFGFYGPMGFDIGAFLGNLILAYFAQDGHDDQVNDRKTYKKWILKTIEQTWNFFHKKFTALWNEHRNGSGEAYLPEIYNNPELQLLTQKKYMQDLLHDTLGFGAAKMIRRIVGVAHVEDFESIVDASKRANCERQALVFAKMLLKERRKFQAITEVVSAIQQEQS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0727 419 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Vvi3g0727 419 PIRSF MTRK 1 419 IPR009212 GO:0009086|GO:0046522
Vvi3g0727 419 SUPERFAMILY Protein kinase-like (PK-like) 3 415 IPR011009 -
Vvi3g0727 419 Pfam Phosphotransferase enzyme family 37 270 IPR002575 -
Vvi3g0727 419 NCBIfam S-methyl-5-thioribose kinase 6 414 IPR009212 GO:0009086|GO:0046522
Vvi3g0727 419 PANTHER METHYLTHIORIBOSE KINASE 1 417 - -
Vvi3g0727 419 Gene3D - 121 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0727 Vvi-Chr3 6391762 6395007 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0727 K00899 - vvi:100264709 853.973