Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0725 ATGGCGTCATCTGGATTCCGGCCCCTTGACGACAAGTCTCTCATAGAGTACATAAAGGCGACGCCCGCTCTCTCCTCCAAGCTTGCAAACCAGCTCGATGGATTGCAGATCAAAGAAGTGGGCGACGGCAATCTCAACTTCGTCTACATCGTCATCTCCTCCAGTGGATCCTTCGTCATCAAACAGGCGTTGCCGTACATACGTTGTATAGGGGAATCGTGGCCGATGACGAAGGAACGGGCGTATTTTGAAGCGACGGCATTGAGAGAGCAGCGTCGCTGGTGCTCCGATCATGTGCCGGAGGTTTATCATTTTGATAGGGAAATGGCTTTAATCGGTATGAGGTACTTGGAGCCTCCGCATATAATTCTTAGAAAGGGCCTGATTGCTGGAATTGAGTACCCTTTGCTTGCTGAACACATGTCTGAGTTTATGGCGAGGACTCTTTTCTTCACATCTCTTCTATACCATGACACAACCGAGCACAAACGTGCAGTTGCTGAATTTTGTGGTAATGTGGAGTTATGTCGGCTCACTGAGCAAGTTGTGTTCTCTGATCCATACAAAGTATCTCAGTACAATCGGTGGACTTCTCCTTATCTTGACCGTGATGCTGAGGCAGTTCGAGAGGATAACATTTTGAAGCTTGAAGTTGCCGAGTTGAAATCTATGTTCTGTGAGAGATCACAAGCCCTAGTACATGGAGATCTTCATACTGGTTCAGTTATGGTTACCCCTGATTCGACTCAAGTTATAGATCCAGAATTTGGATTTTATGGACCAATGGGGTTTGATATAGGCGCATTTTTAGGAAACTTGATTTTGGCTTACTTTGCACAAGATGGGCATGCTGATCAAGTGAATGATAGAAAAACATATAAAGAATGGATTTTGAAGGCAATAGAACAGACTTGGAATCTTTTCCACAAAAAATTTACTGCATTATGGGATGAACACAGGAATGGCTCTGGTGAGGCGTATCTTCCAGAAATTTATAATAACTCTGAACTTCAGCTTCTTACACAAAAGAAATACATGCAAGGTTTGTTGCATGACACCCTCGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTAGCACATGTTGAGGATTTTGAATCAATTGTTGATGCTAGCAAGCGAGCTAACTGTGAGAGACAGGCACTTGTATTTGCAAAGATGCTTTTGAAGGAAAGGAGAAAATTTCAGGCTATCACTGAAGTTGTTTTAGCCGTTCAGCAAGAACAATCATGA 1260 0.4357 MASSGFRPLDDKSLIEYIKATPALSSKLANQLDGLQIKEVGDGNLNFVYIVISSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREQRRWCSDHVPEVYHFDREMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSEFMARTLFFTSLLYHDTTEHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEVAELKSMFCERSQALVHGDLHTGSVMVTPDSTQVIDPEFGFYGPMGFDIGAFLGNLILAYFAQDGHADQVNDRKTYKEWILKAIEQTWNLFHKKFTALWDEHRNGSGEAYLPEIYNNSELQLLTQKKYMQGLLHDTLGFGAAKMIRRIVGVAHVEDFESIVDASKRANCERQALVFAKMLLKERRKFQAITEVVLAVQQEQS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0725 419 SUPERFAMILY Protein kinase-like (PK-like) 3 411 IPR011009 -
Vvi3g0725 419 PANTHER METHYLTHIORIBOSE KINASE 1 417 - -
Vvi3g0725 419 NCBIfam S-methyl-5-thioribose kinase 6 413 IPR009212 GO:0009086|GO:0046522
Vvi3g0725 419 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Vvi3g0725 419 PIRSF MTRK 1 419 IPR009212 GO:0009086|GO:0046522
Vvi3g0725 419 Gene3D - 121 418 - -
Vvi3g0725 419 Pfam Phosphotransferase enzyme family 37 270 IPR002575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0725 Vvi-Chr3 6384840 6387942 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0725 K00899 - vvi:100242426 846.269