Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0724 ATGACATTTTCACCCCCTGGGTTTACATATAGGGAGAGAAGGTTACATCAGATTATGTTTGCAGACCACGACTATCAAAGAGTGGAAAGAGCAGAACTTGGGAAAGATAAGAGCTCAAGGTCCCATGTAACAGTATTGGATTGTATTGAGAAGGATTATACTGTGATTACTATGAGGTCAAAAGATAGGCCAAAGTTGTTGTTTGATACTGTCTGTACTCTAACAGACATGCAGTATGTAGTTTTTCATGGAGCGGTCCACACAGGGAGGATGGAAGCTTATCAGGAATATTATATCAGGCATTGTCTTGAAGCAGCAATTGAAAGGCGAGCGTTTGAGGGACTAAAGCTAGAACTCTACACTGAAGATCGGTTTGGACTTCTGTCTGATATCACCAGGGTATTCAAGGAGACCAGTTTATGTATTAAAATAGCAAAAATATCAACAGAAGGTGGGAAAGCCAAAGACACCTTCTATGTCACAGATGTGATTGGTAATTCGGTCAACCCCCATATTATTGATTCAATTCGCCAACAAATTGGGCACTCCATCCTATAG 558 0.4068 MTFSPPGFTYRERRLHQIMFADHDYQRVERAELGKDKSSRSHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGAVHTGRMEAYQEYYIRHCLEAAIERRAFEGLKLELYTEDRFGLLSDITRVFKETSLCIKIAKISTEGGKAKDTFYVTDVIGNSVNPHIIDSIRQQIGHSIL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0724 185 ProSiteProfiles ACT domain profile. 116 185 IPR002912 -
Vvi3g0724 185 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 184 IPR040217 -
Vvi3g0724 185 SUPERFAMILY ACT-like 114 181 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0724 Vvi-Chr3 6374881 6375830 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0724 - - vvi:100248040 332.028