Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0723 ATGAGAGGGACTGTTGGGGTGATGCCCTTTGAAGACCACACCTCAATTGAATTAAGTGGTACAGACAGGCCTGGTCTACTGTCTGAAGTGTGTGTAGTTCTTGCAGACCTTCACTGTAACGTGGTGAATGCTGAGATATGGACACACAATGCTAGAGTTGTAGCTGTTGTTCATGTTACAGATGATTCCACAGGGTGTGCAATTGAAGACCCTGATCGACTCTAA 225 0.4578 MRGTVGVMPFEDHTSIELSGTDRPGLLSEVCVVLADLHCNVVNAEIWTHNARVVAVVHVTDDSTGCAIEDPDRL* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0723 74 Gene3D - 8 73 - -
Vvi3g0723 74 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 12 74 IPR040217 -
Vvi3g0723 74 SUPERFAMILY ACT-like 10 64 IPR045865 -
Vvi3g0723 74 Pfam ACT domain 14 62 IPR002912 -
Vvi3g0723 74 ProSiteProfiles ACT domain profile. 15 74 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0723 Vvi-Chr3 6374596 6374820 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0723 - - vvi:100248040 145.976