Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0722 ATGGAGAGGTCTGCGCCGGTCATGTCTCTGTTAATCTGCTTTTTCGTCTTGCACTCCGCCGGAGAAGTCGCCGGCGTCTTAACCGGCGGTTCCAATGTGAGCCGCCCCTTACCGGTGCAGAGCCTCTGTGCTCAGCTTATTCAACCCTCCGGTTATCCTTGTTCCGAACACGCGGTTCAAACCAAGGATGGATATTTGTTGGCTCTTCAACGTGTTTCGTCTCCCACTGTGAATTTAGGATCTCAACCTGGTCCTCCTGTTCTGCTTCTACACGGTCTCTTTATGGCTGGTGATGCATGGTTTTTGGACAACACAGAGCAGTCATTAGGCTTCATCCTTGCAGATCATGGTTTTGATGTATGGGTTGGAAATGTGCGTGGGACACGCTGGAGTCATGGGCACGTCACTTTATCAGAGAAAAACAAGGAATTTTGGGATTGGAGTTGGCAGGAATTGGCACTGTATGATCTTGCAGAAATGATCCATTATATATATACCATGACAAACACCAAAACCTTTGTTGTTGGACACTCACAGGGGACAATCATGGCTTTGGCTGCTTTCACTCAGCCTGAGATAGTGGAAATGGTTGAAGCTGCAGCTCTTCTTTGTCCCATATCATATCTAGAGCATGTCAGTGCTCAATTTGTACTTAGAATGGTCAACATGCATCTTGATCAGATGATTCTTGCTATGGGTATCCATCAACTTAATTTTAGAAGCAATGTGGGAGTTTACCTTTTAAATTCTGTATGTGAAGGCCATTTTGACTGCAATGACTTGCTAAGTTCAATCACAGGGGAAAACTGCTGCTTTAACAACTCACGCATTGACTACTATCTTGGATATGAGCCTCATCCATCATCCTCAAAAAATCTCCACCATCTGTTTCAAATGATCCGAGCTGGAACTTTTGCAAAGTATGACTATGGAATCTGGAGAAATCTCAAGCACTATGGTCAGGTCAATCCACCAAGATTTGATCTTAATAGCATACCCAAGTCATTGCCGATATGGATGGGTTATGGGGGCAGTGATGCCTTGGCAGATTTGACTGATTTCAATCACACACTCACGGAGTTGCCATCCGAACCAGAATTGCTTTATCTTGAGAACTATGGTCACATAGACTTCCTTTTGAGTGTAAATGCAAAGGAAGATGTTTACGATAACATGATCAGGTTTTTTAGGTCACGAGGAAAGTCTAGTTGTTCAGCTGGTTTGTGCAATATATGA 1236 0.4401 MERSAPVMSLLICFFVLHSAGEVAGVLTGGSNVSRPLPVQSLCAQLIQPSGYPCSEHAVQTKDGYLLALQRVSSPTVNLGSQPGPPVLLLHGLFMAGDAWFLDNTEQSLGFILADHGFDVWVGNVRGTRWSHGHVTLSEKNKEFWDWSWQELALYDLAEMIHYIYTMTNTKTFVVGHSQGTIMALAAFTQPEIVEMVEAAALLCPISYLEHVSAQFVLRMVNMHLDQMILAMGIHQLNFRSNVGVYLLNSVCEGHFDCNDLLSSITGENCCFNNSRIDYYLGYEPHPSSSKNLHHLFQMIRAGTFAKYDYGIWRNLKHYGQVNPPRFDLNSIPKSLPIWMGYGGSDALADLTDFNHTLTELPSEPELLYLENYGHIDFLLSVNAKEDVYDNMIRFFRSRGKSSCSAGLCNI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0722 411 PANTHER LYSOSOMAL ACID LIPASE-RELATED 43 398 - -
Vvi3g0722 411 Pfam Partial alpha/beta-hydrolase lipase region 44 102 IPR006693 GO:0006629
Vvi3g0722 411 PIRSF Steryl_ester_lip 2 401 IPR025483 GO:0016788
Vvi3g0722 411 SUPERFAMILY alpha/beta-Hydrolases 44 397 IPR029058 -
Vvi3g0722 411 Gene3D alpha/beta hydrolase 37 398 IPR029058 -
Vvi3g0722 411 FunFam Lipase 36 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0722 Vvi-Chr3 6357520 6364348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0722 38 403 Acyl Lipid Metabolism Gene Families AT2G15230 69.945 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0722 K01052 - vvi:100254271 844.343