Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0716 ATGGGTTCTGAATCAAAGCTAGTTCATGTATTTTTGGTCTCCTTCCCTGGACAAGGGCATGTTAACCCTTTGCTTAGGTTGGGGAAGCGTCTGGCTTCAAAGGGCTTGCTTGTGACTTTCACTACCCCAGAAAGCATTGGGAAACAGATGAGGAAAGCCAGTAATATCACTGACCAACCAACGCCGGTCGGAGATGGTATGATCAGGTTCGAGTTTTTTGAAGATGGGTGGGACGAGAACGAGCCCAAGCGCCAAGACCTCGACTTGTACTTGCCACAGCTGGAGCTCGTGGGCAAGAAGATTATTCCTGAAATGATCAAGAAGAACGCTGAACAAGATCGTCCTGTTTCGTGCCTCATCAACAATCCATTTATTCCATGGGTCTCTGATGTTGCAGCTGATCTTGGACTTCCCAGTGCCATGCTTTGGGTTCAATCTTGCGCTTGCTTTTCTACTTATTACCACTACTACCATGGCTTGGTCCCTTTTCCCTCCGAGGCTGAGCCCGAAATCGATGTTCAACTGCCATGTACGCCTCTCTTGAAGTATGATGAAGTCGCTAGTTTCCTGTACCCGACCACTCCATATCCTTTCCTGAGGAGAGCCATCTTAGGCCAGTACAAGAACCTGGACAAGCCCTTCTGTATATTGATGGATACATTCCAAGAGCTGGAACCCGAAGTCATCAAATACATGTCCAAGATCTGCCCAATCAAGCCTGTAGGACCTCTATACAAGAACCCCAAAGTGCCAAACGCCGCTGTCCGTGGCGACTTCATGAAGGCCGACGACTGCATCGAGTGGCTCGACTCCAAGCCTCCCTCCTCCGTCGTCTACATCTCTTTTGGAAGCGTCGTGTACCTGAAACAAGACCAAGTCGACGAGATCGCTTATGGGCTCTTAAACTCCGGCGTGCAATTCTTATGGGTGATGAAACCACCGCACAAAGACGCCGGCTTGGAACTCCTAGTTCTTCCAGAAGGGTTCTTGGAAAAGGCCGGCGACAAAGGCAAGATGGTCCAGTGGAGCCCGCAAGAGCAAGTCTTAGCCCACCCCTCAGTCGCCTGTTTCGTGACCCACTGCGGTTGGAACTCGTCCATGGAGGCTCTCAGCTCCGGCATGCCGGTGGTGGCATTTCCACAGTGGGGAGACCAAGTCACCGACGCCAAATATCTGGTGGACGTGTTCAAAGTTGGGGTGAGAATGTGCAGAGGTGAGGCGGAAAACAAGCTCATCACCCGGGACGAAGTGGAGAAGTGTCTGATCGAGGCCACAACCGGTGAAAAGGCGGCGGAGCTGAAGCAAAACGCCATGAAGTGGAAGAAGGCGGCGGAGGAGGCAGTTGCAGAGGGCGGCTCCTCGGATCGGAATCTTCAGGAGTTTGTTGATGAAGTCAGTAGGATGAGTATGGTGCTGGTTTGCCAGTCAAACAAAATTTGA 1440 0.5153 MGSESKLVHVFLVSFPGQGHVNPLLRLGKRLASKGLLVTFTTPESIGKQMRKASNITDQPTPVGDGMIRFEFFEDGWDENEPKRQDLDLYLPQLELVGKKIIPEMIKKNAEQDRPVSCLINNPFIPWVSDVAADLGLPSAMLWVQSCACFSTYYHYYHGLVPFPSEAEPEIDVQLPCTPLLKYDEVASFLYPTTPYPFLRRAILGQYKNLDKPFCILMDTFQELEPEVIKYMSKICPIKPVGPLYKNPKVPNAAVRGDFMKADDCIEWLDSKPPSSVVYISFGSVVYLKQDQVDEIAYGLLNSGVQFLWVMKPPHKDAGLELLVLPEGFLEKAGDKGKMVQWSPQEQVLAHPSVACFVTHCGWNSSMEALSSGMPVVAFPQWGDQVTDAKYLVDVFKVGVRMCRGEAENKLITRDEVEKCLIEATTGEKAAELKQNAMKWKKAAEEAVAEGGSSDRNLQEFVDEVSRMSMVLVCQSNKI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0716 479 FunFam Glycosyltransferase 257 446 - -
Vvi3g0716 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 396 IPR002213 GO:0008194
Vvi3g0716 479 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Vvi3g0716 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 9 458 - -
Vvi3g0716 479 FunFam Glycosyltransferase 13 256 - -
Vvi3g0716 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 467 - -
Vvi3g0716 479 CDD GT1_Gtf-like 9 447 IPR002213 GO:0008194
Vvi3g0716 479 Gene3D Glycogen Phosphorylase B; 13 458 - -
Vvi3g0716 479 Gene3D Glycogen Phosphorylase B; 254 446 - -
Vvi3g0716 479 Coils Coil 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0716 Vvi-Chr3 6282074 6283513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0716 8 465 Glycosyltransferase AT4G15480 60.304 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0716 K23279 K08236 vvi:100247052 965.296