Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0714 ATGGGAAAGCTTCCCCCACCAATACTACAGTTTGTAGAAGGCACATTTGGCTACACTCCTGACAATCTTATTTATAAGAACATTGACTTTAGGGTAGACTTAGACTCAAGGATTGCTCTAGTGGGACCCAATGAGACTAAGAAGAGTACTTTGCTAAAGCTCATGACTGGGGATCTGGTTCCTATTGACGGCATGGTCCGACGACACAACCACTTGAGAATTGCTCAGTTCCATCAGCACCTGGCTGAGAAACTTGACTTGGAAATGTTTGTTTTTTTGTACATGATGAGAGAATACCCAAGAAATAAAGAAGAGATGATGATAACTGCAAGTATCCATATCACACAATTCAATCATCAAGACACTTCCACCCCAGGCCTCACAAGCATAAACTCCCATACATGGTCGTCTTGCAGTACCTAG 423 0.4255 MGKLPPPILQFVEGTFGYTPDNLIYKNIDFRVDLDSRIALVGPNETKKSTLLKLMTGDLVPIDGMVRRHNHLRIAQFHQHLAEKLDLEMFVFLYMMREYPRNKEEMMITASIHITQFNHQDTSTPGLTSINSHTWSSCST* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0714 140 FunFam ATP-binding cassette sub-family F member 2 1 100 - -
Vvi3g0714 140 Gene3D - 101 116 IPR047038 -
Vvi3g0714 140 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 2 117 - -
Vvi3g0714 140 Pfam ABC transporter 25 70 IPR003439 GO:0005524
Vvi3g0714 140 Gene3D - 8 100 IPR027417 -
Vvi3g0714 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 100 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0714 Vvi-Chr3 6267395 6267817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0714 K06185 - vvi:100251610 189.119