Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0712 ATGGCCTTGAAGGAGGAGGTAAAGGAAGAGATTCATGTGCTGATGGTGTCGTTCTCGGCGCAAGGCCACATCAACCCAATGCTTAGGCTTGGCAAACGCCTTGTTTCCAAAGGCCTTGATGTTACGCTCGCACTCACAGAGTTTACACGCCAACGAATGCTCAAGTCCACCACCACCACCACCACTAACTGTGTTTCAGGTATCCAACTTGAATTCTTCTCTGACGGCTTCAGCTTAGACTATGATAGGAAGACTAATCTCGATCACTATATGGAAACTCTGGGCAAGATGGGCCCTATCAACTTGTCCAAACTCATCCAAGATCGCTCACAGAGCGGTCTTGGGAAATTCTCTTGCTTGATCAGCAACCCTTTTGTGCCATGGGTGGCTGATGTCGCGGCTGAGCATGGAATCCCATGTGCCCTGCTGTGGATCCAGCCATCCATTCTCTATGCTATCTATTATCGATTCTATAATAGTTTGAATCAATTTCCCACTCTGGAAAACCCTCATATGAGCGTTGAATTACCCGGCTTGCCTTTGTTGAACACTGAGGATTTACCATCGTTTGTTCTTCCTTCTAATCCGTTTGGTAGTTTCCCAAAGTTGTTCTCTGAAATGTTTCAGAACATGAAGAAGATCAAGTGGGTTTTGGGGAATTCATTCCATGAGCTTGAGAAGGATGCTATTGTGTCCATGGCTGAGCTCTGCCCAATACGAACCGTCGGTCCTCTGGTCCCATCAATGCTTCTGGGTGAAGATCAGAGTGCTGATATTGGGGTAGAAATGTGGAAACCAGAGGAAACATGCCTAGAGTGGCTGAAGCAAAAAAAGCCGTGTTCTGTTGTTTACGTATCATTTGGGAGCATTGTTGTGTTATCAGCAAAGCAAATGGAGAACATTGCAACAGGCCTGAAGAACAGTAATCGTCCATTTCTGTGGGTGGTGAAGCCTCAAGACCCTCCAGCATCTGATGGTTCAGGAAAATTGCCAGTAGGGTTTCTGGAAGAAACCAAGGACCAAGGCCTAGTGGTGCCATGGTGCCCTCAAACCATGGTACTAACTCACCCATCCATCTCATGTTTCTTGAGTCACTGTGGCTGGAATTCTACCTTAGAGACCATCGCAGCAGGCGTGCCGGTGATCGCCTACCCACAGTGGACAGACCAGCCCACCAACGCCAAACTTATCGTGGACGTTCTACGCATAGGCGTAAGGCTCAGGCCAAACCAGGATGGCATTGTTACCAATGAGGAGGTAGAGAAAAGCATCGAAGAAATCACAGTCGGGCCCAGGGCAGAAGAAGTCAAGAAGACGGCCGCAGAATTGAAGCAATTAGCTCAAAAAGCAGTCGTCAAAGGCGGCTCATCCGATAGTAACATTCAGTGGTTTGTGGACGAGATCAAGGGCAATTCAATCACGGATCCCTCTAGGTCAACTGCAGTGCAATTGAACCATGAAGACATCGAATAA 1473 0.4773 MALKEEVKEEIHVLMVSFSAQGHINPMLRLGKRLVSKGLDVTLALTEFTRQRMLKSTTTTTTNCVSGIQLEFFSDGFSLDYDRKTNLDHYMETLGKMGPINLSKLIQDRSQSGLGKFSCLISNPFVPWVADVAAEHGIPCALLWIQPSILYAIYYRFYNSLNQFPTLENPHMSVELPGLPLLNTEDLPSFVLPSNPFGSFPKLFSEMFQNMKKIKWVLGNSFHELEKDAIVSMAELCPIRTVGPLVPSMLLGEDQSADIGVEMWKPEETCLEWLKQKKPCSVVYVSFGSIVVLSAKQMENIATGLKNSNRPFLWVVKPQDPPASDGSGKLPVGFLEETKDQGLVVPWCPQTMVLTHPSISCFLSHCGWNSTLETIAAGVPVIAYPQWTDQPTNAKLIVDVLRIGVRLRPNQDGIVTNEEVEKSIEEITVGPRAEEVKKTAAELKQLAQKAVVKGGSSDSNIQWFVDEIKGNSITDPSRSTAVQLNHEDIE* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0712 490 Coils Coil 433 453 - -
Vvi3g0712 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 12 461 - -
Vvi3g0712 490 CDD GT1_Gtf-like 12 444 IPR002213 GO:0008194
Vvi3g0712 490 FunFam Glycosyltransferase 16 259 - -
Vvi3g0712 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 230 427 IPR002213 GO:0008194
Vvi3g0712 490 Gene3D Glycogen Phosphorylase B; 15 461 - -
Vvi3g0712 490 FunFam Glycosyltransferase 260 449 - -
Vvi3g0712 490 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Vvi3g0712 490 Gene3D Glycogen Phosphorylase B; 258 449 - -
Vvi3g0712 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0712 Vvi-Chr3 6255590 6257062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0712 9 468 Glycosyltransferase AT2G23260 45.299 5.54e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0712 K13692 - vvi:100252177 974.926