Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0702 ATGGGCGAATCTGATCATCCTTCTCGTATCTCCGTTCATCAAGCTCTTGGCGGTGGTTCAGTTGCTGATTTCCTGTTGTGGAGACGGTGGTGTGGAGCGGCGGTTTGTCTAGTCTCTGCAAGTAGCTTGTGGTTTCTCTTCGAACGAGCCGGCTATAACCTATTGTCTTTCGTAGCAAATGTGGTGTTGCTTTTGGTTGTGATCCTCTTCCTGTGGGCCAAATCTGCATCTATTCTTAATAGACCTCTGCCTCCTCTCCCTGATATGGAAATCTCTGAAGAATCTGTTGTGAAAGCTGCGGATGTCATTCGAGTATGGATCAATTATGCGTTATCAGTTGCACGGGACATTGCAGTTGGTAGAAATGTGAAACTCTTCCTCCAGGTTGCCTTTGGCTTGTGGGTTGTTTCATATATTGGCAGTCTCTTCAACTTCCTGACTCTTGTCTATATTGGGGTTGTTCTTAGCCTTTCAGTTCCTGTGTTATATGACAAGTATCAGGACCACATTGATGACAAGCTGAGGGTAACACATCGAGTTGTTCAAACACAGTATAAGAAAATTGATGATAAAATCCTAAGAAAGATCCCAATGCCCATCAACATGGGGAAGAAAACTCAGTAG 624 0.4423 MGESDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVANVVLLLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVGRNVKLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRVVQTQYKKIDDKILRKIPMPINMGKKTQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0702 207 Pfam Reticulon 21 175 IPR003388 -
Vvi3g0702 207 ProSiteProfiles Reticulon domain profile. 21 207 IPR003388 -
Vvi3g0702 207 PANTHER RETICULON 11 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0702 Vvi-Chr3 6104160 6105909 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0702 K20723 - vvi:100255583 392.119