Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi3g0686 | ATGGGTGAACAGTTTTATGCCTTGGAAATGGTCAAGGTCCTTGATCCTAGAACCGTATATTTCAGTTCTAGTGTCATTTCACAAGCTGATTCTACCCAAAGACATCAAAAGGGTCTTGATGTGGTGCTGGGACCAAAAAGCGCAGTTCTAATTCTTGACGATACAGAAAGGGCATGGAAGAATCATAAGGACAATTTAATACTGATGGAAAGATACCATTTCTTTGCTTCGAGTTGTCACCAATTTGGTTTCCATTGTAAATCTCTTTCTGAGTTGAAGAGTGATGAAAGTGAACCTGATGGAGCGCTTGCAACTATCCTCAAAGTTCTTCAACAGACCCATAGCACACTCTTTGATCCGGAACTCAGTGATAATTTTTCTGGAAGAGATGTGAGGCAGGTTCTGAATCGATTCGGAGGGAAGTCCAGAAGGGATGCAAGATAG | 444 | 0.4167 | MGEQFYALEMVKVLDPRTVYFSSSVISQADSTQRHQKGLDVVLGPKSAVLILDDTERAWKNHKDNLILMERYHFFASSCHQFGFHCKSLSELKSDESEPDGALATILKVLQQTHSTLFDPELSDNFSGRDVRQVLNRFGGKSRRDAR* | 148 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi3g0686 | 147 | FunFam | - | 1 | 140 | - | - | |
| Vvi3g0686 | 147 | Gene3D | - | 1 | 140 | IPR023214 | - | |
| Vvi3g0686 | 147 | SUPERFAMILY | HAD-like | 1 | 79 | IPR036412 | - | |
| Vvi3g0686 | 147 | PANTHER | RNA POLYMERASE II CTD PHOSPHATASE | 1 | 142 | IPR039189 | GO:0008420 | |
| Vvi3g0686 | 147 | ProSiteProfiles | FCP1 homology domain profile. | 1 | 92 | IPR004274 | - | |
| Vvi3g0686 | 147 | Pfam | NLI interacting factor-like phosphatase | 3 | 80 | IPR004274 | - | |
| Vvi3g0686 | 147 | SMART | forpap2 | 1 | 79 | IPR004274 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi3g0686 | K18999 | - | vvi:100852549 | 287.345 |