Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0681 ATGGTGAACATCGTTACACTGCAGAAGTCCCTTGTCCAAATCCTCATGAAGTTCAACGGAGTTGAACCCAAAAAGGTGGAGATCGAGCCAGGAACCGTCATGAACTTCTGGGCCCCCGCCAAACAAAAAAATGAAGAAACCCAGAAGCCGAATGTGGTTCTTGTTCATGGCTTCGGTGTGGATGGGATACTAACGTGGATGTTCCAAGTTCTTGCTCTCAAAAGCCATTATTCAGTCTACGTGCCGGACCTCCTCTTCTTCGGGGACTCCGCCACCGCCGCCGGGAACAGGTCGCCGAGGTTCCAGGCGGAGTGTCTGGCAACTGGGTTGAGGAAGCTTGGGGTGGAGAGGTGTGTGGTGGTGGGGTTGAGCTACGGAGGCATGATTGGGTTCAAGATGGCTGAACTGTACCCAGATTTGGTGGAGTCAATGGTGGTGAGCGGGTCGGTGGAGGCCTTGACGGAGTCGCTCAGCAATCGGAGGCTGAAGAGGCTAGGGTTCCGGCGGTGGTCGGAGTGTTTGATGCCGACCACTGTGGAAGGCGTGAAGGAGATGTTCAGAGTCGGTACTCACTGGTTACCGCCATGGATTCCCAATTGGATTTTCAAGGACTATCTTGAGGTGATGTTCAGCCACAGAAAGGAGAGAGAAGAACTTCTGGAAGCTTTGGTCATCAGGGACGAGGACTTCACACCGTACCACTACCACCAGAGGATATATCTGCTATGGGGCGATGGTGACAAGCTTTTTGACTTGGAAGTGGCACACAACTTGAAAGAACAATTGGGAGACAAAGCGAAGCTGCAATGCATAGAGAAGGCAGGCCATCTATCTCAATTCGAGAGGCCTTGTGCCTACAACGCCCACCTCAAGCGGATTCTGGCCTCTTTGACAGCATATGAGCAGCTGCAATAA 915 0.5246 MVNIVTLQKSLVQILMKFNGVEPKKVEIEPGTVMNFWAPAKQKNEETQKPNVVLVHGFGVDGILTWMFQVLALKSHYSVYVPDLLFFGDSATAAGNRSPRFQAECLATGLRKLGVERCVVVGLSYGGMIGFKMAELYPDLVESMVVSGSVEALTESLSNRRLKRLGFRRWSECLMPTTVEGVKEMFRVGTHWLPPWIPNWIFKDYLEVMFSHRKEREELLEALVIRDEDFTPYHYHQRIYLLWGDGDKLFDLEVAHNLKEQLGDKAKLQCIEKAGHLSQFERPCAYNAHLKRILASLTAYEQLQ* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0681 304 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Vvi3g0681 304 PRINTS Alpha/beta hydrolase fold signature 239 253 IPR000073 -
Vvi3g0681 304 PRINTS Alpha/beta hydrolase fold signature 134 147 IPR000073 -
Vvi3g0681 304 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Vvi3g0681 304 PANTHER SI:DKEY-122A22.2 1 295 - -
Vvi3g0681 304 PRINTS Epoxide hydrolase signature 134 147 IPR000639 GO:0003824
Vvi3g0681 304 PRINTS Epoxide hydrolase signature 271 293 IPR000639 GO:0003824
Vvi3g0681 304 PRINTS Epoxide hydrolase signature 76 91 IPR000639 GO:0003824
Vvi3g0681 304 PRINTS Epoxide hydrolase signature 120 133 IPR000639 GO:0003824
Vvi3g0681 304 Gene3D alpha/beta hydrolase 5 299 IPR029058 -
Vvi3g0681 304 Pfam alpha/beta hydrolase fold 50 155 IPR000073 -
Vvi3g0681 304 SUPERFAMILY alpha/beta-Hydrolases 17 293 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0681 Vvi-Chr3 5885527 5887385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0681 37 145 Acyl Lipid Metabolism Gene Families AT3G51000 30.088 3.00e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0681 - - vvi:100853904 622.468