Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0671 ATGGCTGCTGCGATCTTGGCTCGGAAGTCTCTTCTCGCTCTTCGCTCTAGGCAACTCGCTGTCGCTGGACCAGCATTGCAGGGTTCAAATCCTAATGGGCATCGTTACATTACACACTCATTCTTCTCTAAAAAAGATGATGAGGAAAGAGAGCAACTTGCTAAGGACATGTCAAAAGACTGGAATTCTGTTTTTAATCATAGCATCAATACCTTATTTCTCACTGAAATGGTTCGGGGTTTGATGTTGACACTTAAGTATTTCTTTGACACACAAGTTACTATCAATTATCCATTTGAAAAAGGCCCTTTGAGCCCTCGTTTTCGTGGAGAACATGCACTCCGACGTTACCCTACAGGAGAGGAGCGCTGCATTGCCTGTAAACTCTGTGAAGCTATATGCCCAGCTCAAGCAATCACCATTGAAGCTGAGGAGCGTGAAGATGGAAGCCGTAGAACGACCAGGTACGACATTGACATGACCAAGTGCATTTACTGTGGATTCTGCCAAGAGGCATGCCCTGTTGATGCCATTGTGGAAGGTCCCAACTTTGAATTCACTACAGAAACTCACGAGGAGCTCCTGTATGATAAAGAGAAATTGCTTGAGAACGGGGATCGCTGGGAAACCGAGATTGCAGAGAACCTCAGAGCTGAAAGCCTCTACCGCTGA 672 0.4598 MAAAILARKSLLALRSRQLAVAGPALQGSNPNGHRYITHSFFSKKDDEEREQLAKDMSKDWNSVFNHSINTLFLTEMVRGLMLTLKYFFDTQVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFTTETHEELLYDKEKLLENGDRWETEIAENLRAESLYR* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0671 223 Gene3D - 97 222 - -
Vvi3g0671 223 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 115 144 IPR017896 -
Vvi3g0671 223 NCBIfam NADH-quinone oxidoreductase, chain I 80 201 IPR010226 GO:0016020|GO:0016651|GO:0051539
Vvi3g0671 223 Hamap NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 71 207 IPR010226 GO:0016020|GO:0016651|GO:0051539
Vvi3g0671 223 FunFam NADH-quinone oxidoreductase subunit I 1 97 220 - -
Vvi3g0671 223 SUPERFAMILY 4Fe-4S ferredoxins 97 207 - -
Vvi3g0671 223 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 IPR017900 -
Vvi3g0671 223 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 163 174 IPR017900 -
Vvi3g0671 223 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 154 183 IPR017896 -
Vvi3g0671 223 PANTHER NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL 52 223 IPR010226 GO:0016020|GO:0016651|GO:0051539
Vvi3g0671 223 Pfam 4Fe-4S dicluster domain 123 177 IPR017896 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0671 K03941 - vvi:100853527 433.721