Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0666 ATGGATGAGAAGCTCATTCAGAGATTGGAGTCCGCGGTGACGCGGCTCGAGGTGGTCACCGCCGGATTCCGAGGAGGTGGTTCGCCGGAGACTGGTGCCGAGGCGGCGCTCGATCCGGCGATCGTGGCGTTCGATGATCTAATGGCGGAGTTTGTCGCTAGGGTTTCGGCTGCTGCGGGGAAGATTGGAGGGAAGGTTTTGGAGGCGACGAAGATTCTGGAGGAGGCGTTCTCGGTTCAAAAGGAGCTGCTTGTGAAGGTCAAGCAGAGTCAGAAACCTGACCCTGCTGGCATGGCTGAATTTCTCAAGCCATTGCATGAAGTAATCATGAAAGCAAATGCATTGACAGAAGGGAGGCGATCTGATTTCTTTAACCACTTGAAAACTGCTGCCGACAGTCTCACTGCTTTAGCTTGGATTGCATACACTGGGAAAGATTGCGGTATGAGCCTTCCTATCGCACATGTGGAAGAGAGTTGGCAAATGGCTGAATTCTACAACAACAAGATTCTTGTAGAGTACAAAACAAAAGACCCAAATCATGTGGAATGGGCCAAAGCTCTGAAAGAACTTTATGTGCCGGGTTTGAGAGATTATGTTAAGCGTTTCTATCCTCTGGGTCCAGTATGGAATCCTACTGGCAAAACAACTGCTTCCGCTCCACCAAAAGCTCCTGGACCAAGTGCTCCTGCTCCTCCACCTCCTCCACCAGCATCTCTCTTCAGTTCTGAACCTTCTCAGGCTTCATCGTCACGCCCAAAGGAAGGAATGGCAGCTGTTTTCCAAGAAATCAATTCGGGGAAGCCTGCGACTTCAGGTTTGAGAAAGGTTACAGATGATATGAAGACAAAGAACCGTGCAGATAGAAGTGGTGTTGTTGGTGCCGGTCAAAAAGAAGGCCGTGTCAGTTCACCTTCTTTTTCTAAAGCAGGGCCTCCAAAGTTAGAGCTTCAAATGGGTCGAAAGTGGGTAGTTGAGAACCAAATTGGAAGGAAGAATCTGGTTATTGATGATTGCGATGCAAAACAGTCTGTGTATGTTTATGGATGCAAAGATTCTGTGTTGAAGATTCAAGGGAAAGTTAACAATATAACGATCGACAAATGCACTAAGATGGGAATTGTATTCGCGGATGTTGTTGCTGCTTGTGAGGTTGTAAATTGCAATAGTGTTGAGGTGCAATGTCAGGGTTCAGCTCCGACAATTTCAGTGGACAACACAGCAGGCTGTCAATTGTATTTAGGCAAAGATGCTCTGGAGGCTTCTATAACAACTGCTAAGTCAAGTGAGATTAATGTATTGGTACCTGGTGCTGAGCCTGATGGTGATTGGGGGGAGCATGCTTTGCCACAGCAATATATTCATGTCTTCAAGGATGGGCAGTTTGTTACAACCCCCGTCTCTCACTCTGGAGGGTAA 1419 0.4764 MDEKLIQRLESAVTRLEVVTAGFRGGGSPETGAEAALDPAIVAFDDLMAEFVARVSAAAGKIGGKVLEATKILEEAFSVQKELLVKVKQSQKPDPAGMAEFLKPLHEVIMKANALTEGRRSDFFNHLKTAADSLTALAWIAYTGKDCGMSLPIAHVEESWQMAEFYNNKILVEYKTKDPNHVEWAKALKELYVPGLRDYVKRFYPLGPVWNPTGKTTASAPPKAPGPSAPAPPPPPPASLFSSEPSQASSSRPKEGMAAVFQEINSGKPATSGLRKVTDDMKTKNRADRSGVVGAGQKEGRVSSPSFSKAGPPKLELQMGRKWVVENQIGRKNLVIDDCDAKQSVYVYGCKDSVLKIQGKVNNITIDKCTKMGIVFADVVAACEVVNCNSVEVQCQGSAPTISVDNTAGCQLYLGKDALEASITTAKSSEINVLVPGAEPDGDWGEHALPQQYIHVFKDGQFVTTPVSHSGG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0666 472 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 312 471 IPR036223 -
Vvi3g0666 472 SMART carp 388 425 IPR006599 -
Vvi3g0666 472 SMART carp 350 387 IPR006599 -
Vvi3g0666 472 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 41 237 IPR036222 -
Vvi3g0666 472 MobiDBLite consensus disorder prediction 223 241 - -
Vvi3g0666 472 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Vvi3g0666 472 MobiDBLite consensus disorder prediction 211 313 - -
Vvi3g0666 472 Gene3D - 311 471 IPR016098 -
Vvi3g0666 472 FunFam Adenylyl cyclase-associated protein 311 471 - -
Vvi3g0666 472 FunFam Adenylyl cyclase-associated protein 40 215 - -
Vvi3g0666 472 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 471 IPR001837 GO:0003779|GO:0007010
Vvi3g0666 472 Pfam Adenylate cyclase associated (CAP) C terminal 312 469 IPR013912 GO:0003779|GO:0007010
Vvi3g0666 472 Gene3D - 40 216 IPR036222 -
Vvi3g0666 472 ProSiteProfiles C-CAP/cofactor C-like domain profile. 312 449 IPR017901 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0666 K17261 - vvi:100853345 877.47