Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0665 ATGCCTACTCTCTCTCACGCTTCCATCTTCTTCTTCTTCTTCTCTCTTCTCTTCCCATCTCTTCGCTTCGCCATTGGGTTTCAGTGGAGTGGTGGAACTCGAGTACATGAATGGGTTTTTGGGTATATAATGGGGGAGAAGCTGGAACAGCGTGGTCAAGATTCGCAGTCTTTCATCGGCATCAACTATGGGCAAGTCGCCAACAACCTACCGCCGCCTGAGGCCACCGCGAAGCTGCTCAAATCCACGTCAATTGAAAAGGTCAGATTATACGGCGCCGATCCGGGAATCATCAAAGCTCTTGCCAACACTGGTATCGGGATCGTTATCGGCGCCGCCAACGGCGACATCCCCGCCCTAGCCTCCGATCCGAACTTCGCGGCTCAGTGGGTGAACTCAAACGTCATCGCCTACTACCCTGCAAGCAAGATTATCCTCATCACTGTTGGCAACGAGGTCATGAGCTCCACCGACCAGAACCTGATGTCGCAGCTCTTGCCGGCGATGCAAAATGTCCAGAATGCCCTCAACGCGGCGTCACTGGGAGGAAAAATCAAGGTCTCAACCGTGCACTCCATGGCCGTGTTGACTCAGTCTGACCCGCCCTCCTCCGGCGCTTTCAACCCGGCGACTTCGGACACAATGAGGGGCTTGTTGGAGTTCCAGAGAAACACTGGCTCGCCTTTTGCCATCAACCCATACCCTTTCTTCGCGTACCAGAGCGATCCCAGGCCCGAGACACTCGCCTTTTGCCTGTTTCAACCCAACGCGGGACGAGTTGACTCGGGCAACAATATCAAGTACACGAACATGTTTGATGCCCAGGTTGATGCTGTGAGATCTGCTTTAAATGCAATGGGATTCAAGGAAGTTGAGATTGTTGTTGCTGAGACAGGGTGGCCATACAGTGGAGATGCCAATGGAGTTGGGCCCAGCATTGAGAATGCGAAGGCCTACAATGGGAATTTGATTGCCCACCTTAGATCAATGGCTGGGACCCCATTGATGCCTGGGAAATCTGTGGATACGTATATTTTTGCACTTTATGATGAGAATTTGAAACCTGGTCCAGGCTCGGAACGGGCATTTGGACTTTTCAAGCCTGATCTTTCCATGACATATGATGTCTCTCTTTCAAAGAGTAGCCAGACCCCATCAACCCCGGAAACTCCAGTGAATCCATCACCAAACCCAACAGCTAGTTCTGTCTGGTGTGTGCCCAAGACTGGTGTTTCTGATGCTCAACTGCAGGCAAATCTTGACTATGCTTGCAGCCAGGGCATCGACTGCACCCCAATTCAACCTGGTGGCGCTTGTTTTGAACCAAACACCGTTGCATCTCATGCTGCTTATGCCATGAACCTGCTCTATCAATCTTCTGGCAAGAATTCATGGAACTGTGATTTCACTCAGACAGCAACGCTCACATCCAGCAATCCAAGTTATAATGCTTGCACTTTCCCTGGTAGCTGA 1473 0.5126 MPTLSHASIFFFFFSLLFPSLRFAIGFQWSGGTRVHEWVFGYIMGEKLEQRGQDSQSFIGINYGQVANNLPPPEATAKLLKSTSIEKVRLYGADPGIIKALANTGIGIVIGAANGDIPALASDPNFAAQWVNSNVIAYYPASKIILITVGNEVMSSTDQNLMSQLLPAMQNVQNALNAASLGGKIKVSTVHSMAVLTQSDPPSSGAFNPATSDTMRGLLEFQRNTGSPFAINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGNNIKYTNMFDAQVDAVRSALNAMGFKEVEIVVAETGWPYSGDANGVGPSIENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDENLKPGPGSERAFGLFKPDLSMTYDVSLSKSSQTPSTPETPVNPSPNPTASSVWCVPKTGVSDAQLQANLDYACSQGIDCTPIQPGGACFEPNTVASHAAYAMNLLYQSSGKNSWNCDFTQTATLTSSNPSYNACTFPGS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0665 490 Gene3D Glycosidases 58 385 - -
Vvi3g0665 490 SUPERFAMILY (Trans)glycosidases 59 377 IPR017853 -
Vvi3g0665 490 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 44 476 IPR044965 GO:0004553|GO:0005975
Vvi3g0665 490 Pfam Glycosyl hydrolases family 17 59 377 IPR000490 GO:0004553|GO:0005975
Vvi3g0665 490 Pfam X8 domain 404 474 IPR012946 -
Vvi3g0665 490 MobiDBLite consensus disorder prediction 377 399 - -
Vvi3g0665 490 SMART X8_cls 403 487 IPR012946 -
Vvi3g0665 490 FunFam glucan endo-1,3-beta-glucosidase 7 399 488 - -
Vvi3g0665 490 Gene3D - 397 487 - -
Vvi3g0665 490 FunFam Glucan endo-1,3-beta-glucosidase 14 57 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0665 Vvi-Chr3 5719572 5723920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0665 54 488 Miscellaneous Gene Families AT2G16230 67.735 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0665 - - vvi:100853320 984.171