Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0654 ATGGAGTCTTCCTTCGCTTTGTTTGTTATTTTCTCACTTGTCTTGGTTGGCAACACAATAGCTGCGAGAAAGGACCCTGGGGAGTATTGGAAAGATGCCATGAAGGATCAGCCCATGCCCAAGGCCATCGAAGGCGTTCTCTCCGCCAAGAACCCCAACTGCCATACAGCTACGGAGGCAAGTAACGAGCAGGCCGATCAGCTTTTAAAGGATTTTGAGCAGAAAGTAGAGAAGGCTTTTGCCGAGGACTTTGAACCCAGACCCAATGTCTCGGTTTACCATGATGATAGTAAAGTTGGAGAAGAAAAATCATTTGTTAAGGACTTTGAGCCCGGGCCTAACGTCTCAGTATACCATGACGATGAAGTTGCTTCAAAGGGAGACAAGTCATTTGTTAATGACTTTGAACCAAGGCCAAATGTCTCTGTTTATAACGACTAA 441 0.4558 MESSFALFVIFSLVLVGNTIAARKDPGEYWKDAMKDQPMPKAIEGVLSAKNPNCHTATEASNEQADQLLKDFEQKVEKAFAEDFEPRPNVSVYHDDSKVGEEKSFVKDFEPGPNVSVYHDDEVASKGDKSFVNDFEPRPNVSVYND* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0654 146 PANTHER PROTEIN, PUTATIVE-RELATED 1 146 - -
Vvi3g0654 146 Pfam Organ specific protein 24 145 IPR024489 -
Vvi3g0654 146 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0654 Vvi-Chr3 5614639 5615199 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0654 - - vvi:100853060 300.441