Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0653 ATGGCTTATTCCTTGGCTTTCTTCACTATTTTCTCGCTTCTCTTGGTGGGCAATGCAATAGGTGGAAGAAAAGAGCCTGGGGAATATTGGAGAGATGTTATGAAGGATGAGCCCATGCCAAAAGCAATCCAAGAGAAGGTTTTCTGGGTTTATGATGATGAGGATGCTAAACTCACAGAAGAGAAATCATTTGTTAAGAACCTTAAGCCCTGGACTAATATCTCAGCCTACCATGATAAAGGTGCTACCAAAGAAGAGAAGCCATTTGTGGGTGACTATGAACCTCGGCCTAATATTTCTGCTTACAATGAGTAA 315 0.4159 MAYSLAFFTIFSLLLVGNAIGGRKEPGEYWRDVMKDEPMPKAIQEKVFWVYDDEDAKLTEEKSFVKNLKPWTNISAYHDKGATKEEKPFVGDYEPRPNISAYNE* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0653 104 Pfam Organ specific protein 24 45 IPR024489 -
Vvi3g0653 104 Pfam Organ specific protein 50 103 IPR024489 -
Vvi3g0653 104 PANTHER PROTEIN, PUTATIVE-RELATED 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0653 Vvi-Chr3 5608901 5610203 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0653 - - vvi:104878807 193.356