Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0650 ATGGCTTCTTCCTTGGCTTTCTTCACTATTTTCTCACTTCTCTTGGCGGGCAATGCAATAGGTGGAAGAAAAGAGCCCGGGGAATACTGGAGAGATGTTATGAAGGATGAGCCCATGCCAAAAGCAATCCAAGGCCTTCTCCCTGAAGATCAATCATCTTCTCTCTCAAGCAAGAAACCCAACTGTCAGACAACTACAGAGGCAAGAAATGGGGATGATGTTGTCAAGGGTTTTGAGCCTAAAAAAGAGAAGGTTTTCTGGGTTTATGATGATGAGGATGCTAAACTCACAGAAGAGAAATCATTTGTTAAGGACCTTGAGCCCTGGACTAATATCTCAGCCTACCATGATAAAGGTGCTACCAAAGAAGAGAAGCCATTTGTGGGTGACTATGAACCTAGGCCTAATATTTCTGCTTACAATGAGTAA 429 0.4312 MASSLAFFTIFSLLLAGNAIGGRKEPGEYWRDVMKDEPMPKAIQGLLPEDQSSSLSSKKPNCQTTTEARNGDDVVKGFEPKKEKVFWVYDDEDAKLTEEKSFVKDLEPWTNISAYHDKGATKEEKPFVGDYEPRPNISAYNE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0650 142 PANTHER PROTEIN, PUTATIVE-RELATED 1 141 - -
Vvi3g0650 142 MobiDBLite consensus disorder prediction 47 73 - -
Vvi3g0650 142 MobiDBLite consensus disorder prediction 47 70 - -
Vvi3g0650 142 MobiDBLite consensus disorder prediction 121 142 - -
Vvi3g0650 142 Pfam Organ specific protein 24 141 IPR024489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0650 Vvi-Chr3 5584650 5585205 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0650 - - vvi:104878807 295.819