Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0649 ATGCCTAGAGAGGAGTTGATGGTGGCTCCAAAATTTCCCATGGATGATTTCCCAGAAGGGGTTAATGTATTGCAACTCCATAGCATGGATGGAAGTGAGAAAAAGGATGGTGGGCAACATGCCATGGAGGACAGATTGCATGGTCATGATAAGCGAGGCGAAGAAACCCGAAAAAGGGAAGACACAGAGCATGTTCATGGTCATTCATCATCCCACATGGATCACTTGGACCCTTCAGTTGTTGTCTTCTTCACTATGAAGGATCTGAAGGTTGGGAAAACAATGCCCATCTACTTTGCCAAAACGGACCCTGCTTCTTCTCCTCGCATGTTACCTAAAGAAGAAGCTGATTCCATTCCTTTCTCATTTGCCCAACTCCCACACCTCCTTGAATTCTTCTCCTTTTCTCAAGGCTCCCCCCAAGCCAGAGCCATGGAAAATACACTTAGAGAATGTGGACTTAAGCCCATCAGAGGAGAGACCAAGTTCTGTGCTACTTCCCTAGAATCCTTGCTTGATTTTGTGCATAGCATCTTTGGGCTGGAGTCCCATTTCCAAGTCTTAACAACTTCCTATCTCACAAAGTCAAGTACCCTTTTCCAAAACTACACCTTCTTGGAAGTGCCTACAGAGATACCAGCTCCCAAAATGGTAGCTTGTCATACTATGCCCTACCCTTATGCAATTTTCTACTGCCATTCCCAAGTGAGTGAGAACAAGGTGTTTAAGGTGTCACTAGAAGGCCAAAATGGAGATAGGGTGGAAGCCTTTGCTGTTTGCCATTTGGATACCTCTGCCTGGAGCCGTGATCATGTGTCGTTCCGTGTGCTCGGGATCGAGCCTGGGACATCCCCTGTGTGTCATTTCTTCCCTGCATCCAACCTCATATGGGTTCCGAGGCCTACTCTGAACTAG 915 0.4689 MPREELMVAPKFPMDDFPEGVNVLQLHSMDGSEKKDGGQHAMEDRLHGHDKRGEETRKREDTEHVHGHSSSHMDHLDPSVVVFFTMKDLKVGKTMPIYFAKTDPASSPRMLPKEEADSIPFSFAQLPHLLEFFSFSQGSPQARAMENTLRECGLKPIRGETKFCATSLESLLDFVHSIFGLESHFQVLTTSYLTKSSTLFQNYTFLEVPTEIPAPKMVACHTMPYPYAIFYCHSQVSENKVFKVSLEGQNGDRVEAFAVCHLDTSAWSRDHVSFRVLGIEPGTSPVCHFFPASNLIWVPRPTLN* 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0649 304 MobiDBLite consensus disorder prediction 26 73 - -
Vvi3g0649 304 Pfam BURP domain 82 299 IPR004873 -
Vvi3g0649 304 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 41 299 IPR044816 -
Vvi3g0649 304 SMART BURP_2 81 300 IPR004873 -
Vvi3g0649 304 ProSiteProfiles BURP domain profile. 83 300 IPR004873 -
Vvi3g0649 304 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0649 Vvi-Chr3 5579675 5580589 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0649 - - vvi:100852969 625.935