Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0648 ATGAGTCAATTAGTCAGCAAACAGATGAAATTCACCTTTCCTTTCTTCATTTCTTTCTTGCTCCTCTTGTTTTCAGGGCTTATTGATGGAAGGAAGGACATGGGAGACTACTGGAAGAGCATAATGAAAGGCCAACCTATGCCAGAAGCAATCAAAGGCTTTATTCATCAAGATCCAGCATCATTCTCATCAAAGGCAAGAAAAATGGACCATTTTGTTAGAGATTTTGATGCCAGGCCTAATAATATTATATATCATGGCCATGTTGAGCGCAAGGGAGAGAAGCCTCTTGGTGTGGAGATGAAGCCTGAGCTGAAGAAAGAGAAGTTCTTCGTGGAGCCTGTAAACCTGAGGGTGAATTTTCATAAGCATGGTCATGATCAGAAAGAGTATAATAACTAG 402 0.4055 MSQLVSKQMKFTFPFFISFLLLLFSGLIDGRKDMGDYWKSIMKGQPMPEAIKGFIHQDPASFSSKARKMDHFVRDFDARPNNIIYHGHVERKGEKPLGVEMKPELKKEKFFVEPVNLRVNFHKHGHDQKEYNN* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0648 133 PANTHER PROTEIN, PUTATIVE-RELATED 9 103 - -
Vvi3g0648 133 Pfam Organ specific protein 32 97 IPR024489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0648 Vvi-Chr3 5578054 5578682 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0648 - - vvi:100852891 257.684