Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0647 ATGGGTCTTGGATTTTCTTCATCATGGAGCCTCAGCTTCTGTGTTCTGCTTGTTTTAATGTCTGCAGAAGCCAGCAAAGGGGAATACAGTCTGCAGGAGCATGAAGATGGAGGTGAAGAAGCCATGGCTAGAAAGCATATCCATACTCATATGGACATGTCCATGCGTATATTCTTCACAATAACTGAACTGAAGGTTGGGAAAAGGATACCTGTTTACTTCTCCAAGAGAGACCCTGCTACCTCTCCTCATCTGCTGCCTAGAGAAGAAGTTGAGTCCATCCCCTTCTCATCAGCCCAACTCCCATACCTTCTTCAGTTCTTCGGATTTTCTCAAGGTTCTCCACAGGCCATAGCCATGGAGAACACACTCAGACACTGTGAGACTGAGCCCATTGAAGGAGAGACCAAGTCATGCGTGACATCCTTAGAATCCATGCTTGATTTTTCCCAGAAAATATTCGGATTGAAGGCCAGTTTTGAAGTTATAAGCACTAAGCTTGGAGAGAAGACAACCAGTCTCCTGCAAAACTATACCATCCTGAAATTGCCCAAGCCCATCTCGGCTCCCAAAATGGTGGCCTGCCATACCTTGCCCTACCCTTATGCAGTTTTCTACTGTCACTTCCAAGAGGGTGAGAACAAGGTGTTTGAGGTTTCACTTGGGGGGGAGAATGGAGATAGAGTGGAAGCTGTTGCTGTTTGCCACATGGATACCTCTCAGTGGAACCAAGATCATGTGTCGTTTCGCTTGCTGGGAGTCCAACCAGGAGCCTCTCCGGTGTGCCATTTCTTCCCAGCAGATAACCTCATTTGGGTTCCTTCACCAGCCTTAATTCAGGACTAA 846 0.4716 MGLGFSSSWSLSFCVLLVLMSAEASKGEYSLQEHEDGGEEAMARKHIHTHMDMSMRIFFTITELKVGKRIPVYFSKRDPATSPHLLPREEVESIPFSSAQLPYLLQFFGFSQGSPQAIAMENTLRHCETEPIEGETKSCVTSLESMLDFSQKIFGLKASFEVISTKLGEKTTSLLQNYTILKLPKPISAPKMVACHTLPYPYAVFYCHFQEGENKVFEVSLGGENGDRVEAVAVCHMDTSQWNQDHVSFRLLGVQPGASPVCHFFPADNLIWVPSPALIQD* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0647 281 ProSiteProfiles BURP domain profile. 58 275 IPR004873 -
Vvi3g0647 281 SMART BURP_2 56 275 IPR004873 -
Vvi3g0647 281 Pfam BURP domain 57 274 IPR004873 -
Vvi3g0647 281 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 38 274 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0647 Vvi-Chr3 5571743 5572737 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0647 - - vvi:100855265 570.081