Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0641 ATGGAGGCTCTCACGGAGCTATGCGACCTGATCGCGGAGAATCCAGAGCAATTCTCGGAGAAACTCGCATGGATTTGCAGCAGATGCCCCCCACCGGAGTCTCTTCTGGGCGGATCTCCTAGGGTTTCGCGCTCTCACCTCAATGCGGTGCTAGCCATCGCCAGATTCCTCGCGCGATGCCCTAATCAGACGGATCACCATCAGCGGCCGCAATCTATGGTTCTCGAGTTTCTCCGATCGGTGCCCTCTTCGTTTAATCAGTCATTCTGGCCTCAATCGTACGGACAGGATGCGATTTCGGCGTTTTATGTTGATTTTTTGGGGTACGTGGCGAAGGCGACTGAATTGTCGCCGGATTTCGCTACGGAGGTGGCCGGATTCGCCGGAGAAGTTTTGATCACGGCGCTGAATCATGATGGTGAAGGTTCGGGGATCTCGAGGGTGTTTTTGATGGCTTTATCGCAGAATTTCCCGCCAATTTTGCCTTCGGATGCCGAGAGATTGGTAACGTCTCTATTGGATCAGTTTGTGGTCTCCGTCCCGGTATCCGCTCCCATGTCGCCGAGGGAGGCAGGAGCGGCAGCATCCGAGACGTCGACGTCGTCTGCCCAGAGCTCGCCGATTAGTGTCAACCATTATCAGCCGAATGATAGTTCAATGAGTCCGGCCAATGAAGTTAGCCGTCTATCAGGTTCTTCTAGTGCTGCAAGCGCGTCCTCCAAGGGGTCCGTGGTGATAAATGGGGGAAGTGTTGCGTTGAAAAGCAGCATCGAACAATTTGGGGTGAGTTATGCGTTTGGTGATGGAGGGGGTGGTGCGGCCATGTTGAGGCAACAAGTTTCGTCGTTCGAGGAAGAGTCAGTGGAGAGCTTGGAGAAGCAAGAGATTGCATTCGAATTGATAGGGCACATATTGGATAAAGTTCATATTGATCCTAAGCTTGTAGAGCAGGTTAGGTTAATTGCAAAGAAACAGCTTCAATCCTTGTCAGCTTTTCTGAAGTTAAGGAAGCGGGATTGGACAGAACAGGGACCGCTACTAAAAACCCGAATAAACACAAAGTTATCTGTATTCCAGGCTGCAGCAAGGTTGAAAATTAAGAGTCTTTCATCCCTTGATTCTGAAGGAAAATCCTCTAAGAGATTGCTGCTTGAAACTCTTGCATTGCTGGTAGATGCTTCTGAAGCATGTTTACTATCAGTGTGGAGAAAGTTGAGAATTTGTGAAGAGCTATTCAGCTCTTTGCTAGCTGGAATTTTGCAAATTGCTTTAACTCGTGGAGGCCAGCTGTTAAGGGTTTTGCTTATTCGTCTCAAATCTCTTGTGCTGACTGCATGTGCACAGGCTGATACTTGGGGTAATAGTCAGGGAGCCATGTTTGAGATTGTCATGAAGACAAGTTGTGAGATAATCGAATTTGGTTGGATCAAAGACAGGGCTCCTGTGGACACTTTCATCTTGGGATTAGCTTCAAGTATTCGTGAACGGAACGATTATGAGGAACAGGATGGGAAAGAAAAACAGGCAACTCCTGTTGTGCAGCTTAATGTTATACGCTTGCTGGCTGATTTGAATGTTTCCATTAACAAGTCTGAAGTGGTAGACATGATATTGCCGCTATTTATTGAAAGCTTGGAAGAGGGTGATGCTTCAACTCCTAGCTCATTACGACTCCGAATTCTTGATGCTGCGTCTCGCATGGCTAGTTTAGGTTTTGAAAAGTCCTACCGTGAGACAGTTGTTCTGATGACGAGAAGTTATTTGAGTAAACTTTCTAGTGTAGGATCTGCAGAAAGCAAAACGTTAGCTCCAGAAGCCACTACAGAACGTGTTGAGACTCTTCCTGCAGGGTTTCTTCTGATTGCTAGCAAGCTTGCGAATGCTAAATTGCGGTCAGATTATCGACACCGTTTGCTGTCTTTGTGCTCAGATGTAGGGTTGGCTGCAGAATCCAAAAGTGGAAGGAGCGGAGCAGATTTTCTGGGACCTTTACTTCCTGCTGTTGCTGAAATATGTTCTGATTTTGATCCTACTTTAGATGTGGAACCTTCAATTCTAAAATTATTTAGGAACTTGTGGTTCTATGTTGCACTTTTCGGGTTAGCCCCTCCCATACAGAAAAATCAGCCTCAGATAAAGTCAGTTTCAACAACTCTGAATAGTGTGGGTAGCATGGGTGCACTTGCTCTTCAGGCTGTGGGTGGACCATACATGTGGAATACTCAGTGGTCTGCTGCAGTTCAACGAATTGCTCAGGGGACCCCACCCCTTGTTGTTAGCTCAGTAAAATGGCTTGAAGATGAATTGGAACTTAATGCTCTTCACAATCCTGGAAGTCGTCGAGGGAGTGGCAACGAGAAAGCTGCTGTAGCCCAAAGAGCTGCTCTTTCTGCTGCTTTAGCAGGACGAGTTGAGGTTACTGCAATGAGCACAATTTCAGGCGTCAAGGCTACCTATCTCCTTGCAGTAGCTTTTTTGGAGATTATACGATTCAGCAGCAATGGTGGCATACTTAACGGTGGTGGTGCCAGTTTGAATGCTTCTAGAAGTGCCTTCAGCTGTGTCTTTGAGTACCTCAAAACTCCAAATCTTATGCCAGCTGTCTTCCAGTGTTTGACAGCAATAGTCCACACAGCATTTGAAACAGCAGTATCATGGCTGGAGGATCGAATATCTGATACCGGAAATGAAGCTGAGATCAGAGAATCTACTCTTTCTGCTCATGCCTGTTTTCTCATAAAGAACATGTCTCAAAGGGAGGAACACATTCGAGATATCTCTGTCAACTTGTTGAGTCAACTTAGAGAAAGGTTTCTTCAGGTTCTATGGAATTCCTCCTGTCTGGATTCCCTGCTATTTTCAGTTCATGATGAGTCGCCTTCTGCTCTTTTCAATGATCCTGCTTGGGTAGCAACCATACGTTCTTTATATCAAAAGGTTGTTCGAGAGTGGATCATAAATTCACTTTCATATGCTCCATGCACCAGCCAGGGTCTTCTTCAGGAAAAGCTTTGTAAAGCAAACACATGGCAGAGAGCTCAGCATAAGCCTGATGTGGTCTCTCTTCTATCTGAGATACGGATTGGCACTGGGAAAAATGATAGTTGGATAGGTACACGAACAGCAAATGTTCCTGCAGTTATTGCTGCAGCTGCTGCAGCATCAGGAGCAAACTTTAAATTGATAGACGCCTTCAACTTGGAGGTTCTAAGTACAGGAATAGTCAGTGCAACAGTTAAGTGCAATCACGCTGGAGAAATTGCTGGAATGAGAAGGTTTTACGACAGCATTGATGGATTTCAACCTGGTGCTGCCCCAACAGGCTTTGCTCTTGGCCTTCAAAGGTTGAGATCTGGAGTGTCTCATCAACCACAGCCTGAGAATGAGTCTTTTAATGAAATTTTGCTTAACAAATTTGTGCGTCGACTTCAACAATTTGTTAACATTGCAGAGAAAGGTGGGGAAGTGAATAAGTTGTCATTTCGTGAAATTTGTTCTCAGGCAACTGCATTGCTTCTCTCAAATCTGGGCTCTGACTCAAAATCGAATCTAGAAGGCTCCTCACAACTTCTACGTCTTCTTTGTTGGTGTCCGGCTTACATTTCCACCCCGGATGCAATGGAAACTGGTGTATTCATTTGGACTTGGTTAGTTTCTGCTGCACCTCAACTGGGATCTCTTGTCCTTGCTGAGCTTGTTGATGCATGGTTGTGGACAATCGACACAAAACGTGGTCTCTTTGCGTCTGAAGCAAGGTATTCGGGACCAACTGCAAAATTAAGGCCTCATCTTTCCCCTGGAGAGCCAGAACAACTGCCAGAAAAGGATCCTGTTGAACAGATAATCGCTCATAGACTCTGGCTTGGGTTCTTGATTGACCGCTTTGAGGTAGTTAGGCACAATAGTGTTGAACAACTCTTGCTTCTTGGTCGAATGTTACAAGGGACTGCAAAACTACCTTGGAAGTTTTCACGTCATCCTGCAGCTACTGGTACTTTTTTCACTGTCATGCTTCTTGGGCTCAAATTCTGCTCATGCCAGTCTCAGGGCAATCTGCAGAGTTTTAAAACTGGGCTTCAGCTGCTAGAAGATCGGATTTATCGGGCTTCTTTGGGCTGGTTTGCTTATGAACCTGAATGGTATGACATGAACAACATAAATTTTGCCCAGAGTGAGGCTCAATCTGTTTCTATATTTGTTCATTATCTTTCAAATGAACGGGTGGATACTGTTCAACCAGAGTCAAAAAAGGGTGTGCGTGAAAATGGGAGCTCTTTGGGTGATGTGAAGGATCAATATCACCCTGTTTGGGGACAGATGGAGAACTATGCTGCTGGAAGAGAAAAACGTAAGCAGTTGCTTTTGATGCTATGCCAGCATGAAGCTGATAGACTTCACGTTTGGGCACAACCCACCAACTCAAGTTCATCTTCTCGGCTAAAAATTAGCTCAGAGAAATGGATTGAGTTTGCCAGAACTGCCTTTTCTGTTGATCCACGGATAGCTTTATCCTTGGCCTCAAGGTTCCCAACAGTTCCTTCCTTGAAGGCTGAAGTGACTCAGCTGGTTCAGTTGCACATAATGGAGCTCCGCTGCATGCCAGAAGCATTGCCATATTTTGTCACCCCAAAAGCAGTTGATGAAAATTCAACACTCTTGCAACAATTGCCACATTGGGCAGCTTGTTCAATTACGCAGGCTCTTGAGTTCCTTACTCCTGCATATAAGGGACACCCACGTGTTATGGCTTATGTTCTTAGGGTTTTGGAATCATATCCTCCTAATCGAGTTACTTTTTTCATGCCCCAGCTGGTTCAGGCTTTACGCTATGATGAAGGGAGGTTGGTTGAAGGATATTTGCTTAGAGCTGCTCAAAGGAGTGATATATTTGCTCATATTCTGATATGGCATCTACAGGGTGAGCAATATGGTCCAGAATTGGGAAAAGATGCAGCCTCTGCAAAGAATAGTTCATTTCAAGCGTTATTGCCAGTTGTTAGGCAGCGAATTGTTGATGGTTTCACCCCCAAAGCCCTTGATTTGTATAATAGAGAATTTCGTTTCTTTGACCAAGTCACATCTATTTCTGGTGTACTTCTGCCACTTCCGAAGGAAGAACGACCAGCTGGTATCAGGAGGGAATTGAAGAAAATTCAAATGGAAGGAGAAGACCTTTATCTACCTACTGCTACTACTAAACTTGTCAAGGGTATTCAGGTGGATAGTGGGATAACTTTACAGTCAGCAGCAAAAGTTCCAATTATGATTACATTTAATGTGGTTGATCGGGAAGGGAATCATAATGATATAAAGCCCCAAGCTTGCATTTTCAAAGTAGGAGATGATTGTCGGCAAGATGTGCTTGCTCTACAAGTGATTTCTCTTCTTCGAGACATATTTGAAGCAGTTGGACTTAATCTCTATGTGTTTCCTTATGGAGTTCTCCCAACTGGCCCAGGGAGAGGGATAATTGAGGTTGTGCCTAATTCACGGAGCAGAAGTCAGATGGGTGAAACCACTGATGGTGGTCTGTATGAGATTTTTCAACAGGACTTCGGACCAGTTGGGTCTCCCAGTTTTGAAAATGCACGTGATAACTTCATTATTAGCAGTGCTGGTTATGCAGTTGCCAGCCTAATACTTCAACCTAAGGATAGGCACAATGGGAACCTTCTTTTTGACAAGGAGGGAAGGCTTGTTCATATCGATTTTGGTTTTATACTGGAAACTTCACCTGGTGGAAATATGCGATTTGAAAGTGCCCACTTCAAGCTGAGCCATGAGATGACTCAATTACTTGATCCATCTGGGGTTATGAAAAGTGAAACCTGGTACAAGTTTGTAAGCTTGTGCGTGAAGGGCTACCTTGCTGCCCGCCGATACATGGATGGGATTGTGAACACGGTGTTGATGATGGTAGACAGCGGATTACCCTGCTTCAGTAGGGGTGACCCCATTGGAAATCTTCGCAAGAGATTCCATCCCGAGATGAGCGACCGTGAGGCAGCCAACTTCATGATCCGCACATGCATAGATGCCTACAACAAGTGGACCACTGCTGGGTATGATTTGATACAATACTTACAACAGGGCATCGAGCAGTGA 6105 0.4523 MEALTELCDLIAENPEQFSEKLAWICSRCPPPESLLGGSPRVSRSHLNAVLAIARFLARCPNQTDHHQRPQSMVLEFLRSVPSSFNQSFWPQSYGQDAISAFYVDFLGYVAKATELSPDFATEVAGFAGEVLITALNHDGEGSGISRVFLMALSQNFPPILPSDAERLVTSLLDQFVVSVPVSAPMSPREAGAAASETSTSSAQSSPISVNHYQPNDSSMSPANEVSRLSGSSSAASASSKGSVVINGGSVALKSSIEQFGVSYAFGDGGGGAAMLRQQVSSFEEESVESLEKQEIAFELIGHILDKVHIDPKLVEQVRLIAKKQLQSLSAFLKLRKRDWTEQGPLLKTRINTKLSVFQAAARLKIKSLSSLDSEGKSSKRLLLETLALLVDASEACLLSVWRKLRICEELFSSLLAGILQIALTRGGQLLRVLLIRLKSLVLTACAQADTWGNSQGAMFEIVMKTSCEIIEFGWIKDRAPVDTFILGLASSIRERNDYEEQDGKEKQATPVVQLNVIRLLADLNVSINKSEVVDMILPLFIESLEEGDASTPSSLRLRILDAASRMASLGFEKSYRETVVLMTRSYLSKLSSVGSAESKTLAPEATTERVETLPAGFLLIASKLANAKLRSDYRHRLLSLCSDVGLAAESKSGRSGADFLGPLLPAVAEICSDFDPTLDVEPSILKLFRNLWFYVALFGLAPPIQKNQPQIKSVSTTLNSVGSMGALALQAVGGPYMWNTQWSAAVQRIAQGTPPLVVSSVKWLEDELELNALHNPGSRRGSGNEKAAVAQRAALSAALAGRVEVTAMSTISGVKATYLLAVAFLEIIRFSSNGGILNGGGASLNASRSAFSCVFEYLKTPNLMPAVFQCLTAIVHTAFETAVSWLEDRISDTGNEAEIRESTLSAHACFLIKNMSQREEHIRDISVNLLSQLRERFLQVLWNSSCLDSLLFSVHDESPSALFNDPAWVATIRSLYQKVVREWIINSLSYAPCTSQGLLQEKLCKANTWQRAQHKPDVVSLLSEIRIGTGKNDSWIGTRTANVPAVIAAAAAASGANFKLIDAFNLEVLSTGIVSATVKCNHAGEIAGMRRFYDSIDGFQPGAAPTGFALGLQRLRSGVSHQPQPENESFNEILLNKFVRRLQQFVNIAEKGGEVNKLSFREICSQATALLLSNLGSDSKSNLEGSSQLLRLLCWCPAYISTPDAMETGVFIWTWLVSAAPQLGSLVLAELVDAWLWTIDTKRGLFASEARYSGPTAKLRPHLSPGEPEQLPEKDPVEQIIAHRLWLGFLIDRFEVVRHNSVEQLLLLGRMLQGTAKLPWKFSRHPAATGTFFTVMLLGLKFCSCQSQGNLQSFKTGLQLLEDRIYRASLGWFAYEPEWYDMNNINFAQSEAQSVSIFVHYLSNERVDTVQPESKKGVRENGSSLGDVKDQYHPVWGQMENYAAGREKRKQLLLMLCQHEADRLHVWAQPTNSSSSSRLKISSEKWIEFARTAFSVDPRIALSLASRFPTVPSLKAEVTQLVQLHIMELRCMPEALPYFVTPKAVDENSTLLQQLPHWAACSITQALEFLTPAYKGHPRVMAYVLRVLESYPPNRVTFFMPQLVQALRYDEGRLVEGYLLRAAQRSDIFAHILIWHLQGEQYGPELGKDAASAKNSSFQALLPVVRQRIVDGFTPKALDLYNREFRFFDQVTSISGVLLPLPKEERPAGIRRELKKIQMEGEDLYLPTATTKLVKGIQVDSGITLQSAAKVPIMITFNVVDREGNHNDIKPQACIFKVGDDCRQDVLALQVISLLRDIFEAVGLNLYVFPYGVLPTGPGRGIIEVVPNSRSRSQMGETTDGGLYEIFQQDFGPVGSPSFENARDNFIISSAGYAVASLILQPKDRHNGNLLFDKEGRLVHIDFGFILETSPGGNMRFESAHFKLSHEMTQLLDPSGVMKSETWYKFVSLCVKGYLAARRYMDGIVNTVLMMVDSGLPCFSRGDPIGNLRKRFHPEMSDREAANFMIRTCIDAYNKWTTAGYDLIQYLQQGIEQ* 2035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0641 2034 SUPERFAMILY Protein kinase-like (PK-like) 1677 2027 IPR011009 -
Vvi3g0641 2034 Gene3D - 1678 1825 - -
Vvi3g0641 2034 SMART pi3k_hr2_4 1496 1684 IPR001263 -
Vvi3g0641 2034 Pfam Phosphatidylinositol 3- and 4-kinase 1834 1981 IPR000403 -
Vvi3g0641 2034 SMART pi3k_hr1_6 1774 2031 IPR000403 -
Vvi3g0641 2034 MobiDBLite consensus disorder prediction 189 240 - -
Vvi3g0641 2034 Pfam PI4-kinase N-terminal region 298 1474 IPR045495 -
Vvi3g0641 2034 FunFam Phosphatidylinositol 4-kinase alpha 1 1826 2022 - -
Vvi3g0641 2034 FunFam Phosphatidylinositol 4-kinase alpha 1 1678 1825 - -
Vvi3g0641 2034 CDD PI4Kc_III_alpha 1734 2033 - -
Vvi3g0641 2034 ProSiteProfiles PIK helical domain profile. 1477 1669 IPR001263 -
Vvi3g0641 2034 SUPERFAMILY ARM repeat 154 968 IPR016024 -
Vvi3g0641 2034 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1740 2018 IPR000403 -
Vvi3g0641 2034 PANTHER PHOSPHATIDYLINOSITOL KINASE 515 2033 IPR015433 GO:0046854|GO:0048015
Vvi3g0641 2034 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1777 1791 IPR018936 GO:0016301
Vvi3g0641 2034 Gene3D - 1826 2022 IPR036940 -
Vvi3g0641 2034 Gene3D - 1474 1660 IPR042236 -
Vvi3g0641 2034 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 1533 1648 IPR001263 -
Vvi3g0641 2034 SUPERFAMILY ARM repeat 1479 1646 IPR016024 -
Vvi3g0641 2034 MobiDBLite consensus disorder prediction 193 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0641 Vvi-Chr3 5494395 5528939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0641 1 2034 Acyl Lipid Metabolism Gene Families AT1G49340 75.783 0.0 3111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0641 K00888 - vvi:100852729 3885.88