Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0637 ATGAAAGATTTCCTCAAGTCACTCTCCAAGAGGCTCAAAGGCAACATCGCTGGTTATGAGAACTACCATAGGGTCTATGTTCCTGAGAGACAGTCTCCTAAGTTTGATCCCAAGGAGCCTTTGCGGGTTTATGTTCTATTCCAGCATATACAGAAAATGCTGTCGGGCGAGATTACTGTCATTGCTGAGACTGGATATTCTTGGTTTAACTGTCAGAAACTGAAATTGCCTAGGAAATGCAGATATGAGTTCCAAATGCAATACGGATCAATTGGTTGGTTAGTAGGCGTCACACTTGGGTATGTACAGGCCACGCCCAAGAAGAGGGTGATGATTTCTTGCATTGGTGATGGTAGTTTTTACGTGACTCTGCTAGATATCTCTATAATGATCCTTTTGATAAGGAACAGGCAGTAG 417 0.4293 MKDFLKSLSKRLKGNIAGYENYHRVYVPERQSPKFDPKEPLRVYVLFQHIQKMLSGEITVIAETGYSWFNCQKLKLPRKCRYEFQMQYGSIGWLVGVTLGYVQATPKKRVMISCIGDGSFYVTLLDISIMILLIRNRQ* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0637 138 PANTHER PYRUVATE DECARBOXYLASE 1 131 IPR012110 GO:0016831
Vvi3g0637 138 Gene3D - 31 133 - -
Vvi3g0637 138 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 40 131 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0637 Vvi-Chr3 5459440 5459856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0637 K01568 - vvi:109122072 231.491