Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0634 ATGGCCCTTTTCGGATCCAATGTCTCAAGCGAGGTTGGATTGCGGTTGCTCCTTTGTCCACTTGGTTCCAATGTTGTGGTCCGAACAGCATGCTGTTCTGTGGGAATTGTTTTTCCTGTTTATTCTACATTTAAAGCAATTGAGAAGAAAGATCAAAATGAGCAACAGAGGTGGCTTGTGTACTGGGCAGCCTATGGATCTTTTAGTCTTGCAGAAGCATTTGCAGACAAAGTTCTTTACTGGTTTCCACTCTACTACCATATGAAGTTTGCATTTCTTGTTTGGCTTCAACTTCCATCTACTGATGGGGCAGGGCATTTGTACATGAGGCATCTGCGTCCATTCCTTTTGAGGCATCAAGCTAAACTTGATCAAATTATGGGGCTTTTATATGGTGAAATGGCTAAATTTATTAGTCTACACCAAGCAGAAATCCAGTTGGCAAGGACATTTGTCATGAAGGTTTTGGCAGGAGTCCGAGATATCATTCACTCAGACGTAAAGCAAGTGACTGGCGCGATCGAGGGTCCAACGACCAGACGGACGCATGACTCAACAACAACCCAACCAACGCATGATTCAGTGATTGAGAACCCCACAACAGGGAGACAAACACAGGACTCAGAATCCAACCATGAAGAATGA 645 0.4419 MALFGSNVSSEVGLRLLLCPLGSNVVVRTACCSVGIVFPVYSTFKAIEKKDQNEQQRWLVYWAAYGSFSLAEAFADKVLYWFPLYYHMKFAFLVWLQLPSTDGAGHLYMRHLRPFLLRHQAKLDQIMGLLYGEMAKFISLHQAEIQLARTFVMKVLAGVRDIIHSDVKQVTGAIEGPTTRRTHDSTTTQPTHDSVIENPTTGRQTQDSESNHEE* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0634 214 MobiDBLite consensus disorder prediction 173 214 - -
Vvi3g0634 214 PANTHER HVA22-LIKE PROTEINS 27 128 IPR004345 -
Vvi3g0634 214 Pfam TB2/DP1, HVA22 family 39 115 IPR004345 -
Vvi3g0634 214 MobiDBLite consensus disorder prediction 175 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0634 Vvi-Chr3 5446009 5454012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0634 K17279 - vvi:100855164 426.787