Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0630 ATGGTCATAATAGCTTATGGGTTTGACGAACTCTTTGAGGAACCTAGCATGGGTTGGGCGAAAACTTCTCATTCAATACGGAATTGGCTTTACAACTCTGGTTTGTTTTACATTAGGCCTACAATCCCCTCCATCGAGCTTTCGGATCGTGTGTTTGGTCGGCCTTTGAAGGAGCCAGAGGCTTGGGACAAGCTACTTTTCAATGAGGAACTCTTTTTCCCTTCTCATCCTGGGTATAATGGGCTTCATGCTTCCAAGAGAACCATGGATTTCTACCTCTTTCTGAATAGCAAGGTCCTGTTCAGGACTGTCAGGAAAGATGCTAATCTGATCAAGACCAAGCCAGTGACTGTTCATATCAATTACCATCCTGACAAGCTTGCAAGAATGAAAGCAGTTATGGAATTCTATATGGATGGCAACCTAGATGCTTTGAAACCCTTCCCTGATGGTTCGGAATGGTAA 465 0.4387 MVIIAYGFDELFEEPSMGWAKTSHSIRNWLYNSGLFYIRPTIPSIELSDRVFGRPLKEPEAWDKLLFNEELFFPSHPGYNGLHASKRTMDFYLFLNSKVLFRTVRKDANLIKTKPVTVHINYHPDKLARMKAVMEFYMDGNLDALKPFPDGSEW* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0630 154 Pfam Nucleotide-diphospho-sugar transferase 22 130 IPR005069 -
Vvi3g0630 154 PANTHER ARABINOSYLTRANSFERASE RRA3 4 153 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0630 Vvi-Chr3 5430214 5430678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0630 K20783 - csin:114293767 251.136