Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0627 ATGGGTAAAGGAGGGGGCTGTGTCCTAAGCAAGAAGAGAATGCCACCGTCCGTATCCGACGATCCTCCCAACGAGGACACGGATATCCCTGTTCCGCTTCTGGACACCGCTATTCCAGAAGCTGGTGACCTCAATTCGCCTTCGAAATTGAGAATCTTCATCGTTTTCTATTCCATGTACGGACACGTGGAGATTTTGGCGAGGAGAATTAAGTCGGGAGTGGACAGCGTTGACGGGGTTGAAGGGGTTCTTTTCCGGATCCCGGAAACGATGCCGCCTGAGGTTTTGGAGCAGATGAAGGTGCCGCAGAAGGCCGACGACGTGCCGGTGATGTCCGAGGCCGCGGAGCTGGTGGAGGCTGACGGACTGCTGTTTGGTTTTCCGACCAGATACGGCTCTATGGCGGCGCAGATGAAGGCGTTTTTCGATTCCACGGGGCAGCTGTGGAGGGAGCAGAAGCTCGCCGGCGTGCCCGCCGGATTCTTCGTGAGCACCGGAACACAGGGTGGCGGCCAAGAGACTACAGCTTGGACAGCAATCACCCAGTTAGCTCACCATGGGATGCTCTATGTTCCCATTGGGTACACATTTGGAGCTGGGATGTTCAAGATGGACTCCATTAGAGGGGGGTCTCCATATGGTGCAGGTGTTTTTTCAGGAGATGGGACAAGGGAACCAAGTGAGACAGAGCTAGCACTTGCAGAGCATCAAGGCAAGTACATGGCTGCAATAGTCAAGAGGTTTGGCCGGCCTCGAACCCTCGAACCCTAA 771 0.5538 MGKGGGCVLSKKRMPPSVSDDPPNEDTDIPVPLLDTAIPEAGDLNSPSKLRIFIVFYSMYGHVEILARRIKSGVDSVDGVEGVLFRIPETMPPEVLEQMKVPQKADDVPVMSEAAELVEADGLLFGFPTRYGSMAAQMKAFFDSTGQLWREQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLYVPIGYTFGAGMFKMDSIRGGSPYGAGVFSGDGTREPSETELALAEHQGKYMAAIVKRFGRPRTLEP* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0627 256 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 51 247 IPR010089 GO:0003955|GO:0010181
Vvi3g0627 256 SUPERFAMILY Flavoproteins 51 248 IPR029039 -
Vvi3g0627 256 Pfam NADPH-dependent FMN reductase 65 193 IPR005025 GO:0016491
Vvi3g0627 256 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 51 248 - -
Vvi3g0627 256 Gene3D - 49 249 IPR029039 -
Vvi3g0627 256 ProSiteProfiles Flavodoxin-like domain profile. 52 241 IPR008254 GO:0010181
Vvi3g0627 256 MobiDBLite consensus disorder prediction 1 29 - -
Vvi3g0627 256 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 49 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0627 Vvi-Chr3 5411236 5413972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0627 K03809 - vvi:100257247 506.523